Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 NUTM2HP-201ENST00000442076 2498 ntBASIC14.03□□□□□ -0.16
NCK1P16333 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NCK1P16333 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NCK1P16333 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.03□□□□□ -0.16
NCK1P16333 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
NCK1P16333 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.03□□□□□ -0.16
NCK1P16333 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.03□□□□□ -0.16
NCK1P16333 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.03□□□□□ -0.16
NCK1P16333 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.03□□□□□ -0.16
NCK1P16333 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NCK1P16333 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.03□□□□□ -0.16
NCK1P16333 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NCK1P16333 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NCK1P16333 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.03□□□□□ -0.16
NCK1P16333 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NCK1P16333 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.03□□□□□ -0.16
NCK1P16333 AGAP10P-201ENST00000454844 2418 ntBASIC14.03□□□□□ -0.16
NCK1P16333 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NCK1P16333 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.03□□□□□ -0.16
NCK1P16333 Z82170.1-201ENST00000625081 3192 ntBASIC14.03□□□□□ -0.16
NCK1P16333 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.03□□□□□ -0.16
NCK1P16333 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NCK1P16333 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NCK1P16333 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NCK1P16333 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.02□□□□□ -0.16
NCK1P16333 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NCK1P16333 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NCK1P16333 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NCK1P16333 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
NCK1P16333 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.02□□□□□ -0.16
NCK1P16333 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NCK1P16333 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NCK1P16333 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NCK1P16333 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NCK1P16333 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NCK1P16333 AC215219.1-201ENST00000400706 1817 ntBASIC14.02□□□□□ -0.16
NCK1P16333 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.02□□□□□ -0.16
NCK1P16333 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NCK1P16333 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.02□□□□□ -0.16
NCK1P16333 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NCK1P16333 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NCK1P16333 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.02□□□□□ -0.16
NCK1P16333 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NCK1P16333 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.02□□□□□ -0.16
NCK1P16333 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NCK1P16333 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NCK1P16333 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
NCK1P16333 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NCK1P16333 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NCK1P16333 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NCK1P16333 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NCK1P16333 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NCK1P16333 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NCK1P16333 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NCK1P16333 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NCK1P16333 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.02□□□□□ -0.17
NCK1P16333 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NCK1P16333 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NCK1P16333 AC010327.4-202ENST00000591484 748 ntBASIC14.02□□□□□ -0.17
NCK1P16333 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.02□□□□□ -0.17
NCK1P16333 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
NCK1P16333 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.02□□□□□ -0.17
NCK1P16333 AC073592.8-201ENST00000624126 511 ntBASIC14.02□□□□□ -0.17
NCK1P16333 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NCK1P16333 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.02□□□□□ -0.17
NCK1P16333 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NCK1P16333 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NCK1P16333 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NCK1P16333 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NCK1P16333 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NCK1P16333 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NCK1P16333 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NCK1P16333 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NCK1P16333 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NCK1P16333 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NCK1P16333 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 AC073548.1-201ENST00000624088 1882 ntBASIC14.01□□□□□ -0.17
NCK1P16333 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NCK1P16333 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NCK1P16333 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms