Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
RARAP10276 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.54■□□□□ 0.08
RARAP10276 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.54■□□□□ 0.08
RARAP10276 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RARAP10276 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.54■□□□□ 0.08
RARAP10276 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.54■□□□□ 0.08
RARAP10276 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RARAP10276 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
RARAP10276 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
RARAP10276 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.54■□□□□ 0.08
RARAP10276 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.54■□□□□ 0.08
RARAP10276 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.54■□□□□ 0.08
RARAP10276 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
RARAP10276 ENPP7P14-201ENST00000621765 1040 ntBASIC15.54■□□□□ 0.08
RARAP10276 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 CICP16-201ENST00000502609 2813 ntBASIC15.54■□□□□ 0.08
RARAP10276 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.54■□□□□ 0.08
RARAP10276 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.54■□□□□ 0.08
RARAP10276 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RARAP10276 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RARAP10276 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.54■□□□□ 0.08
RARAP10276 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RARAP10276 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RARAP10276 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RARAP10276 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RARAP10276 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.54■□□□□ 0.08
RARAP10276 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 AC089987.1-201ENST00000551654 2209 ntBASIC15.53■□□□□ 0.08
RARAP10276 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RARAP10276 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.53■□□□□ 0.08
RARAP10276 COL6A4P2-202ENST00000504443 2753 ntBASIC15.53■□□□□ 0.08
RARAP10276 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.53■□□□□ 0.08
RARAP10276 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.53■□□□□ 0.08
RARAP10276 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.53■□□□□ 0.08
RARAP10276 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RARAP10276 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RARAP10276 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.53■□□□□ 0.08
RARAP10276 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.53■□□□□ 0.08
RARAP10276 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RARAP10276 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
RARAP10276 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.53■□□□□ 0.08
RARAP10276 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.53■□□□□ 0.08
RARAP10276 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.53■□□□□ 0.08
RARAP10276 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.53■□□□□ 0.08
RARAP10276 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.53■□□□□ 0.08
RARAP10276 RN7SL692P-201ENST00000464677 288 ntBASIC15.53■□□□□ 0.08
RARAP10276 AC011495.1-201ENST00000498085 584 ntBASIC15.53■□□□□ 0.08
RARAP10276 MESTP3-201ENST00000503460 968 ntBASIC15.53■□□□□ 0.08
RARAP10276 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 AP005018.1-201ENST00000525475 301 ntBASIC15.53■□□□□ 0.08
RARAP10276 AC131206.1-201ENST00000538078 1211 ntBASIC15.53■□□□□ 0.08
RARAP10276 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.53■□□□□ 0.08
RARAP10276 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.53■□□□□ 0.08
RARAP10276 GNRHR2-203ENST00000581100 1187 ntBASIC15.53■□□□□ 0.08
RARAP10276 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.53■□□□□ 0.08
RARAP10276 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RARAP10276 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RARAP10276 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
RARAP10276 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.53■□□□□ 0.08
RARAP10276 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RARAP10276 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RARAP10276 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.53■□□□□ 0.08
RARAP10276 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RARAP10276 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.53■□□□□ 0.08
RARAP10276 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RARAP10276 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RARAP10276 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RARAP10276 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
RARAP10276 AC020910.5-201ENST00000623668 1865 ntBASIC15.52■□□□□ 0.08
RARAP10276 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RARAP10276 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RARAP10276 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RARAP10276 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RARAP10276 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RARAP10276 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
RARAP10276 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms