Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSF1P09603 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSF1P09603 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CSF1P09603 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSF1P09603 SERBP1P5-201ENST00000510079 1181 ntBASIC12.89□□□□□ -0.35
CSF1P09603 CR383656.12-201ENST00000549567 513 ntBASIC12.89□□□□□ -0.35
CSF1P09603 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.89□□□□□ -0.35
CSF1P09603 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.89□□□□□ -0.35
CSF1P09603 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.89□□□□□ -0.35
CSF1P09603 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.89□□□□□ -0.35
CSF1P09603 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CSF1P09603 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.89□□□□□ -0.35
CSF1P09603 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
CSF1P09603 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSF1P09603 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSF1P09603 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSF1P09603 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSF1P09603 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CSF1P09603 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSF1P09603 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.89□□□□□ -0.35
CSF1P09603 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSF1P09603 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSF1P09603 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSF1P09603 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSF1P09603 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSF1P09603 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSF1P09603 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSF1P09603 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CSF1P09603 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.88□□□□□ -0.35
CSF1P09603 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.88□□□□□ -0.35
CSF1P09603 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.88□□□□□ -0.35
CSF1P09603 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.88□□□□□ -0.35
CSF1P09603 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 MIR346-201ENST00000362234 95 ntBASIC12.88□□□□□ -0.35
CSF1P09603 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.88□□□□□ -0.35
CSF1P09603 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.88□□□□□ -0.35
CSF1P09603 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.88□□□□□ -0.35
CSF1P09603 KRT17P7-201ENST00000451704 1104 ntBASIC12.88□□□□□ -0.35
CSF1P09603 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.88□□□□□ -0.35
CSF1P09603 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.88□□□□□ -0.35
CSF1P09603 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.88□□□□□ -0.35
CSF1P09603 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.88□□□□□ -0.35
CSF1P09603 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
CSF1P09603 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.88□□□□□ -0.35
CSF1P09603 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.88□□□□□ -0.35
CSF1P09603 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.88□□□□□ -0.35
CSF1P09603 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.88□□□□□ -0.35
CSF1P09603 AL008721.1-201ENST00000609964 604 ntBASIC12.88□□□□□ -0.35
CSF1P09603 AL662799.1-202ENST00000614205 422 ntBASIC12.88□□□□□ -0.35
CSF1P09603 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.88□□□□□ -0.35
CSF1P09603 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CSF1P09603 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.88□□□□□ -0.35
CSF1P09603 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.88□□□□□ -0.35
CSF1P09603 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
CSF1P09603 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.88□□□□□ -0.35
CSF1P09603 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.88□□□□□ -0.35
CSF1P09603 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.88□□□□□ -0.35
CSF1P09603 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CSF1P09603 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 AC100757.3-201ENST00000622361 1406 ntBASIC12.88□□□□□ -0.35
CSF1P09603 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSF1P09603 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSF1P09603 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSF1P09603 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.87□□□□□ -0.35
CSF1P09603 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CSF1P09603 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSF1P09603 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
CSF1P09603 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSF1P09603 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CSF1P09603 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSF1P09603 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSF1P09603 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CSF1P09603 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSF1P09603 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.87□□□□□ -0.35
CSF1P09603 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms