Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DOAP06340 AC091046.1-201ENST00000331871 207 ntBASIC17.31■□□□□ 0.36
HLA-DOAP06340 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DOAP06340 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DOAP06340 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DOAP06340 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HLA-DOAP06340 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.31■□□□□ 0.36
HLA-DOAP06340 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DOAP06340 TMEM198B-204ENST00000484016 896 ntBASIC17.31■□□□□ 0.36
HLA-DOAP06340 IGLV3-15-201ENST00000518356 244 ntBASIC17.31■□□□□ 0.36
HLA-DOAP06340 PRKXP1-201ENST00000561423 1122 ntBASIC17.31■□□□□ 0.36
HLA-DOAP06340 MIR3188-201ENST00000583494 85 ntBASIC17.31■□□□□ 0.36
HLA-DOAP06340 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.31■□□□□ 0.36
HLA-DOAP06340 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DOAP06340 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DOAP06340 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DOAP06340 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DOAP06340 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HLA-DOAP06340 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DOAP06340 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DOAP06340 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DOAP06340 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HLA-DOAP06340 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DOAP06340 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DOAP06340 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DOAP06340 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DOAP06340 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
HLA-DOAP06340 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DOAP06340 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DOAP06340 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DOAP06340 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DOAP06340 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DOAP06340 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DOAP06340 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DOAP06340 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DOAP06340 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HLA-DOAP06340 TBC1D3J-201ENST00000620719 1426 ntBASIC17.3■□□□□ 0.36
HLA-DOAP06340 KHSRPP1-201ENST00000427983 1768 ntBASIC17.3■□□□□ 0.36
HLA-DOAP06340 TCAF2P1-201ENST00000291129 2421 ntBASIC17.3■□□□□ 0.36
HLA-DOAP06340 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOAP06340 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOAP06340 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOAP06340 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DOAP06340 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOAP06340 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.3■□□□□ 0.36
HLA-DOAP06340 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOAP06340 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOAP06340 TSPY25P-201ENST00000429463 745 ntBASIC17.3■□□□□ 0.36
HLA-DOAP06340 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DOAP06340 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HLA-DOAP06340 CEP164P1-201ENST00000455142 418 ntBASIC17.3■□□□□ 0.36
HLA-DOAP06340 RN7SL258P-201ENST00000478664 300 ntBASIC17.3■□□□□ 0.36
HLA-DOAP06340 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DOAP06340 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOAP06340 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DOAP06340 AC128714.1-201ENST00000637035 887 ntBASIC17.3■□□□□ 0.36
HLA-DOAP06340 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOAP06340 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOAP06340 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOAP06340 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOAP06340 AC006504.5-208ENST00000588784 2401 ntBASIC17.3■□□□□ 0.36
HLA-DOAP06340 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOAP06340 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DOAP06340 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DOAP06340 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOAP06340 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DOAP06340 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOAP06340 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HLA-DOAP06340 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOAP06340 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.29■□□□□ 0.36
HLA-DOAP06340 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 AL161772.1-201ENST00000610494 4412 ntBASIC17.29■□□□□ 0.36
HLA-DOAP06340 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 AC008723.1-201ENST00000506922 207 ntBASIC17.29■□□□□ 0.36
HLA-DOAP06340 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 PGAM1P5-201ENST00000548011 764 ntBASIC17.29■□□□□ 0.36
HLA-DOAP06340 AC003686.1-201ENST00000550956 1034 ntBASIC17.29■□□□□ 0.36
HLA-DOAP06340 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms