Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC8.86□□□□□ -0.99
APOBP04114 URAHP-205ENST00000610227 398 ntBASIC8.86□□□□□ -0.99
APOBP04114 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 VDAC1P11-201ENST00000458323 852 ntBASIC8.86□□□□□ -0.99
APOBP04114 RNU1-80P-201ENST00000459500 161 ntBASIC8.86□□□□□ -0.99
APOBP04114 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC8.86□□□□□ -0.99
APOBP04114 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC8.86□□□□□ -0.99
APOBP04114 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
APOBP04114 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC8.86□□□□□ -0.99
APOBP04114 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC8.86□□□□□ -0.99
APOBP04114 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC8.86□□□□□ -0.99
APOBP04114 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 MIR1226-201ENST00000408658 75 ntBASIC8.85□□□□□ -0.99
APOBP04114 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC8.85□□□□□ -0.99
APOBP04114 GARS-210ENST00000627489 324 ntTSL 4 BASIC8.85□□□□□ -0.99
APOBP04114 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
APOBP04114 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
APOBP04114 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
APOBP04114 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 AC073210.1-201ENST00000414799 232 ntBASIC8.85□□□□□ -0.99
APOBP04114 RPSAP6-201ENST00000417882 882 ntBASIC8.85□□□□□ -0.99
APOBP04114 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC8.85□□□□□ -0.99
APOBP04114 POLR2LP1-206ENST00000444785 187 ntBASIC8.85□□□□□ -0.99
APOBP04114 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC8.85□□□□□ -0.99
APOBP04114 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC8.85□□□□□ -0.99
APOBP04114 RN7SL605P-201ENST00000577229 281 ntBASIC8.85□□□□□ -0.99
APOBP04114 RN7SL121P-201ENST00000584223 273 ntBASIC8.85□□□□□ -0.99
APOBP04114 EMP3-204ENST00000596315 761 ntTSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC8.85□□□□□ -0.99
APOBP04114 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC8.85□□□□□ -0.99
APOBP04114 ESR1-214ENST00000638569 132 ntTSL 5 BASIC8.85□□□□□ -0.99
APOBP04114 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 POLL-206ENST00000370172 2308 ntTSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 AIG1-203ENST00000367596 559 ntTSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC8.85□□□□□ -0.99
APOBP04114 AL161932.2-201ENST00000435436 679 ntBASIC8.85□□□□□ -0.99
APOBP04114 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC8.85□□□□□ -0.99
APOBP04114 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC8.85□□□□□ -0.99
APOBP04114 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC8.85□□□□□ -0.99
APOBP04114 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC8.85□□□□□ -0.99
APOBP04114 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 GGNBP1-204ENST00000613113 887 ntBASIC8.85□□□□□ -0.99
APOBP04114 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 AC103702.1-201ENST00000548801 2630 ntBASIC8.85□□□□□ -0.99
APOBP04114 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
APOBP04114 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC8.85□□□□□ -0.99
APOBP04114 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC8.85□□□□□ -0.99
APOBP04114 Z98885.3-201ENST00000624882 1757 ntBASIC8.85□□□□□ -0.99
APOBP04114 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms