Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HLA-DRAP01903 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HLA-DRAP01903 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.87■□□□□ 0.13
HLA-DRAP01903 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.87■□□□□ 0.13
HLA-DRAP01903 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.87■□□□□ 0.13
HLA-DRAP01903 AC079178.1-201ENST00000420915 656 ntBASIC15.87■□□□□ 0.13
HLA-DRAP01903 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.87■□□□□ 0.13
HLA-DRAP01903 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 RNA5SP412-201ENST00000516234 123 ntBASIC15.87■□□□□ 0.13
HLA-DRAP01903 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
HLA-DRAP01903 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.87■□□□□ 0.13
HLA-DRAP01903 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
HLA-DRAP01903 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 AC005089.1-201ENST00000619486 2241 ntBASIC15.86■□□□□ 0.13
HLA-DRAP01903 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 MIR4783-201ENST00000580343 82 ntBASIC15.86■□□□□ 0.13
HLA-DRAP01903 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 AC244157.2-201ENST00000616239 1006 ntBASIC15.86■□□□□ 0.13
HLA-DRAP01903 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DRAP01903 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DRAP01903 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HLA-DRAP01903 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRAP01903 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
HLA-DRAP01903 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.85■□□□□ 0.13
HLA-DRAP01903 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRAP01903 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRAP01903 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
HLA-DRAP01903 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRAP01903 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HLA-DRAP01903 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRAP01903 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRAP01903 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRAP01903 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRAP01903 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DRAP01903 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.85■□□□□ 0.13
HLA-DRAP01903 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HLA-DRAP01903 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HLA-DRAP01903 AL035414.1-201ENST00000451327 857 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms