Protein–RNA interactions for Protein: O95361

TRIM16, Tripartite motif-containing protein 16, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16O95361 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
TRIM16O95361 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.08■□□□□ 0
TRIM16O95361 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM16O95361 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM16O95361 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRIM16O95361 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM16O95361 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.08■□□□□ 0
TRIM16O95361 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.08■□□□□ 0
TRIM16O95361 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRIM16O95361 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRIM16O95361 FTLP1-201ENST00000449155 526 ntBASIC15.08■□□□□ 0
TRIM16O95361 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TRIM16O95361 AC126915.1-201ENST00000522847 1038 ntBASIC15.08■□□□□ 0
TRIM16O95361 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM16O95361 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.08■□□□□ 0
TRIM16O95361 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.08■□□□□ 0
TRIM16O95361 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.08■□□□□ 0
TRIM16O95361 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRIM16O95361 AP005019.2-201ENST00000615104 511 ntBASIC15.08■□□□□ 0
TRIM16O95361 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.08■□□□□ 0
TRIM16O95361 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRIM16O95361 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM16O95361 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
TRIM16O95361 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.08■□□□□ 0
TRIM16O95361 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.08■□□□□ 0
TRIM16O95361 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.08■□□□□ 0
TRIM16O95361 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.08■□□□□ 0
TRIM16O95361 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM16O95361 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
TRIM16O95361 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM16O95361 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM16O95361 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM16O95361 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRIM16O95361 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.08■□□□□ 0
TRIM16O95361 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM16O95361 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.08■□□□□ 0
TRIM16O95361 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM16O95361 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM16O95361 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM16O95361 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.07■□□□□ 0
TRIM16O95361 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.07■□□□□ 0
TRIM16O95361 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM16O95361 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM16O95361 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRIM16O95361 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.07■□□□□ 0
TRIM16O95361 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM16O95361 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM16O95361 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.07■□□□□ 0
TRIM16O95361 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.07■□□□□ 0
TRIM16O95361 RN7SL720P-201ENST00000488178 304 ntBASIC15.07■□□□□ 0
TRIM16O95361 RNA5SP486-201ENST00000515961 83 ntBASIC15.07■□□□□ 0
TRIM16O95361 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.07■□□□□ 0
TRIM16O95361 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.07■□□□□ 0
TRIM16O95361 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.07■□□□□ 0
TRIM16O95361 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.07■□□□□ 0
TRIM16O95361 AC006453.4-201ENST00000636949 1252 ntBASIC15.07■□□□□ 0
TRIM16O95361 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM16O95361 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRIM16O95361 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM16O95361 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM16O95361 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM16O95361 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM16O95361 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.07■□□□□ 0
TRIM16O95361 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM16O95361 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM16O95361 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.07■□□□□ 0
TRIM16O95361 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM16O95361 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
TRIM16O95361 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRIM16O95361 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM16O95361 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.07■□□□□ 0
TRIM16O95361 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRIM16O95361 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRIM16O95361 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRIM16O95361 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM16O95361 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM16O95361 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM16O95361 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM16O95361 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
TRIM16O95361 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM16O95361 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM16O95361 CICP24-201ENST00000605464 2705 ntBASIC15.06■□□□□ 0
TRIM16O95361 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM16O95361 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM16O95361 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM16O95361 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRIM16O95361 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.06■□□□□ 0
TRIM16O95361 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.06■□□□□ 0
TRIM16O95361 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.06■□□□□ 0
TRIM16O95361 CHMP4BP1-201ENST00000556017 588 ntBASIC15.06■□□□□ 0
TRIM16O95361 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.06■□□□□ 0
TRIM16O95361 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM16O95361 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM16O95361 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.06■□□□□ 0
TRIM16O95361 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.06■□□□□ 0
TRIM16O95361 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.06■□□□□ 0
TRIM16O95361 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
TRIM16O95361 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM16O95361 LILRP1-201ENST00000444199 1370 ntBASIC15.06■□□□□ 0
TRIM16O95361 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms