Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.86□□□□□ -0.35
CCNKO75909 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.86□□□□□ -0.35
CCNKO75909 AC008608.2-201ENST00000606089 416 ntBASIC12.86□□□□□ -0.35
CCNKO75909 AL031055.1-201ENST00000606362 631 ntBASIC12.86□□□□□ -0.35
CCNKO75909 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.86□□□□□ -0.35
CCNKO75909 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.86□□□□□ -0.35
CCNKO75909 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.86□□□□□ -0.35
CCNKO75909 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CCNKO75909 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCNKO75909 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
CCNKO75909 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.86□□□□□ -0.35
CCNKO75909 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCNKO75909 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCNKO75909 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.86□□□□□ -0.35
CCNKO75909 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCNKO75909 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCNKO75909 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCNKO75909 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CCNKO75909 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.86□□□□□ -0.35
CCNKO75909 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
CCNKO75909 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CCNKO75909 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCNKO75909 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCNKO75909 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
CCNKO75909 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.86□□□□□ -0.35
CCNKO75909 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.85□□□□□ -0.35
CCNKO75909 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.85□□□□□ -0.35
CCNKO75909 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CCNKO75909 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CCNKO75909 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CCNKO75909 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.85□□□□□ -0.35
CCNKO75909 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.85□□□□□ -0.35
CCNKO75909 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.85□□□□□ -0.35
CCNKO75909 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.85□□□□□ -0.35
CCNKO75909 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.85□□□□□ -0.35
CCNKO75909 AC021087.4-201ENST00000563761 564 ntBASIC12.85□□□□□ -0.35
CCNKO75909 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.85□□□□□ -0.35
CCNKO75909 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.85□□□□□ -0.35
CCNKO75909 AC026992.2-203ENST00000563004 2419 ntBASIC12.85□□□□□ -0.35
CCNKO75909 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CCNKO75909 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.85□□□□□ -0.35
CCNKO75909 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.85□□□□□ -0.35
CCNKO75909 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CCNKO75909 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CCNKO75909 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC12.85□□□□□ -0.35
CCNKO75909 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CCNKO75909 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCNKO75909 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CCNKO75909 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.84□□□□□ -0.35
CCNKO75909 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.84□□□□□ -0.35
CCNKO75909 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CCNKO75909 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.84□□□□□ -0.35
CCNKO75909 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
CCNKO75909 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CCNKO75909 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
CCNKO75909 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.84□□□□□ -0.35
CCNKO75909 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC12.84□□□□□ -0.35
CCNKO75909 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCNKO75909 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms