Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
GPC4O75487 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC4O75487 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GPC4O75487 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.92□□□□□ -0.02
GPC4O75487 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC4O75487 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC4O75487 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GPC4O75487 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.92□□□□□ -0.02
GPC4O75487 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
GPC4O75487 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.91□□□□□ -0.02
GPC4O75487 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.91□□□□□ -0.02
GPC4O75487 AL137783.1-201ENST00000623494 1896 ntBASIC14.91□□□□□ -0.02
GPC4O75487 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.91□□□□□ -0.02
GPC4O75487 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.91□□□□□ -0.02
GPC4O75487 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.91□□□□□ -0.02
GPC4O75487 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.91□□□□□ -0.02
GPC4O75487 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.91□□□□□ -0.02
GPC4O75487 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
GPC4O75487 BAATP1-201ENST00000412284 1225 ntBASIC14.91□□□□□ -0.02
GPC4O75487 NME2P1-201ENST00000426182 414 ntBASIC14.91□□□□□ -0.02
GPC4O75487 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.91□□□□□ -0.02
GPC4O75487 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.91□□□□□ -0.02
GPC4O75487 AC012441.1-201ENST00000446669 685 ntBASIC14.91□□□□□ -0.02
GPC4O75487 INE1-201ENST00000456273 945 ntBASIC14.91□□□□□ -0.02
GPC4O75487 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
GPC4O75487 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.91□□□□□ -0.02
GPC4O75487 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.91□□□□□ -0.02
GPC4O75487 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.91□□□□□ -0.02
GPC4O75487 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.91□□□□□ -0.02
GPC4O75487 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.91□□□□□ -0.02
GPC4O75487 AL603764.1-201ENST00000636452 321 ntBASIC14.91□□□□□ -0.02
GPC4O75487 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
GPC4O75487 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
GPC4O75487 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 MSTO2P-201ENST00000314835 1709 ntBASIC14.91□□□□□ -0.02
GPC4O75487 AC097359.2-201ENST00000604992 2389 ntBASIC14.91□□□□□ -0.02
GPC4O75487 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
GPC4O75487 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.91□□□□□ -0.02
GPC4O75487 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
GPC4O75487 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC4O75487 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.9□□□□□ -0.02
GPC4O75487 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.9□□□□□ -0.02
GPC4O75487 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
GPC4O75487 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.9□□□□□ -0.02
GPC4O75487 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
GPC4O75487 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 AC006504.5-208ENST00000588784 2401 ntBASIC14.9□□□□□ -0.02
GPC4O75487 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
GPC4O75487 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
GPC4O75487 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
GPC4O75487 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.9□□□□□ -0.02
GPC4O75487 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.9□□□□□ -0.02
GPC4O75487 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.9□□□□□ -0.02
GPC4O75487 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.9□□□□□ -0.02
GPC4O75487 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.9□□□□□ -0.02
GPC4O75487 AC007389.4-201ENST00000454674 793 ntBASIC14.9□□□□□ -0.02
GPC4O75487 KRT18P25-201ENST00000508931 1278 ntBASIC14.9□□□□□ -0.02
GPC4O75487 AC022616.1-201ENST00000518688 554 ntBASIC14.9□□□□□ -0.02
GPC4O75487 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
GPC4O75487 PTP4A1P2-201ENST00000546033 454 ntBASIC14.9□□□□□ -0.02
GPC4O75487 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
GPC4O75487 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.9□□□□□ -0.02
GPC4O75487 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
GPC4O75487 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.9□□□□□ -0.02
GPC4O75487 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.9□□□□□ -0.02
GPC4O75487 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.9□□□□□ -0.02
GPC4O75487 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC4O75487 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms