Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC28A2O43868 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 AL359258.3-201ENST00000622910 2331 ntBASIC14.36□□□□□ -0.11
SLC28A2O43868 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
SLC28A2O43868 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SLC28A2O43868 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC28A2O43868 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
SLC28A2O43868 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC28A2O43868 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC28A2O43868 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC28A2O43868 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
SLC28A2O43868 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SLC28A2O43868 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC28A2O43868 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC28A2O43868 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC28A2O43868 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SLC28A2O43868 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.35□□□□□ -0.11
SLC28A2O43868 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SLC28A2O43868 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC28A2O43868 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC28A2O43868 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.35□□□□□ -0.11
SLC28A2O43868 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.35□□□□□ -0.11
SLC28A2O43868 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC28A2O43868 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SLC28A2O43868 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SLC28A2O43868 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC28A2O43868 AP003419.4-201ENST00000616071 517 ntBASIC14.35□□□□□ -0.11
SLC28A2O43868 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.35□□□□□ -0.11
SLC28A2O43868 AC138951.2-201ENST00000623455 1161 ntBASIC14.35□□□□□ -0.11
SLC28A2O43868 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC28A2O43868 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.35□□□□□ -0.11
SLC28A2O43868 AL645728.2-202ENST00000641679 227 ntBASIC14.35□□□□□ -0.11
SLC28A2O43868 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC28A2O43868 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SLC28A2O43868 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
SLC28A2O43868 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC28A2O43868 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC28A2O43868 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SLC28A2O43868 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC28A2O43868 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SLC28A2O43868 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC28A2O43868 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC28A2O43868 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SLC28A2O43868 AC015656.1-201ENST00000624209 3578 ntBASIC14.34□□□□□ -0.11
SLC28A2O43868 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC28A2O43868 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC28A2O43868 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC28A2O43868 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC28A2O43868 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A2O43868 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.34□□□□□ -0.11
SLC28A2O43868 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC28A2O43868 HOMER2P2-201ENST00000451621 847 ntBASIC14.34□□□□□ -0.11
SLC28A2O43868 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC28A2O43868 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.34□□□□□ -0.11
SLC28A2O43868 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC28A2O43868 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SLC28A2O43868 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC28A2O43868 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms