Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00473A8K010 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00473A8K010 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
LINC00473A8K010 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00473A8K010 MBLAC2-202ENST00000514906 1936 ntBASIC12.07□□□□□ -0.48
LINC00473A8K010 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.07□□□□□ -0.48
LINC00473A8K010 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.07□□□□□ -0.48
LINC00473A8K010 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00473A8K010 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00473A8K010 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00473A8K010 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LINC00473A8K010 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
LINC00473A8K010 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00473A8K010 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.06□□□□□ -0.48
LINC00473A8K010 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
LINC00473A8K010 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
LINC00473A8K010 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.06□□□□□ -0.48
LINC00473A8K010 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.06□□□□□ -0.48
LINC00473A8K010 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
LINC00473A8K010 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.06□□□□□ -0.48
LINC00473A8K010 WASH4P-201ENST00000564273 1246 ntBASIC12.06□□□□□ -0.48
LINC00473A8K010 MIR6074-201ENST00000612054 107 ntBASIC12.06□□□□□ -0.48
LINC00473A8K010 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00473A8K010 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LINC00473A8K010 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00473A8K010 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00473A8K010 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 CLUHP2-201ENST00000426660 1303 ntBASIC12.06□□□□□ -0.48
LINC00473A8K010 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
LINC00473A8K010 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00473A8K010 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
LINC00473A8K010 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
LINC00473A8K010 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00473A8K010 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.05□□□□□ -0.48
LINC00473A8K010 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
LINC00473A8K010 KRT8P24-201ENST00000560290 1559 ntBASIC12.05□□□□□ -0.48
LINC00473A8K010 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00473A8K010 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00473A8K010 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00473A8K010 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00473A8K010 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
LINC00473A8K010 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC00473A8K010 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC00473A8K010 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LINC00473A8K010 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LINC00473A8K010 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
LINC00473A8K010 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.05□□□□□ -0.48
LINC00473A8K010 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.05□□□□□ -0.48
LINC00473A8K010 FAM207CP-201ENST00000443486 507 ntBASIC12.05□□□□□ -0.48
LINC00473A8K010 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.05□□□□□ -0.48
LINC00473A8K010 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC00473A8K010 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LINC00473A8K010 LINC02560-201ENST00000596379 459 ntBASIC12.05□□□□□ -0.48
LINC00473A8K010 AC138696.2-201ENST00000607376 223 ntBASIC12.05□□□□□ -0.48
LINC00473A8K010 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00473A8K010 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
LINC00473A8K010 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC00473A8K010 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
LINC00473A8K010 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
LINC00473A8K010 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms