Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 KRT19P4-201ENST00000443208 943 ntBASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 CDK4P1-201ENST00000454213 828 ntBASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 RN7SL672P-201ENST00000474091 317 ntBASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 BAK1P2-201ENST00000532665 631 ntBASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 KLF17P1-201ENST00000547105 1126 ntBASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 AC016582.2-202ENST00000587765 1094 ntBASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 AC245369.7-201ENST00000631386 350 ntBASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 ESR1-214ENST00000638569 132 ntTSL 5 BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TMEM88BA6NKF7 AC067931.2-201ENST00000623655 2003 ntBASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 SLC25A15P1-201ENST00000456738 342 ntBASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 AC092910.2-201ENST00000491262 348 ntBASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 SLC25A15P3-201ENST00000505530 290 ntBASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 BATF-202ENST00000555504 361 ntTSL 2 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 RN7SL440P-201ENST00000577855 343 ntBASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 MIR4746-201ENST00000579802 71 ntBASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 AL136982.5-201ENST00000605222 294 ntBASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 AC048382.6-201ENST00000621980 1223 ntBASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 SSR4P1-203ENST00000599569 2260 ntBASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.75■□□□□ 0.27
TMEM88BA6NKF7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 SIGLEC20P-201ENST00000595243 1311 ntBASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 TREX1-203ENST00000456089 629 ntTSL 3 BASIC16.74■□□□□ 0.27
TMEM88BA6NKF7 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms