Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 FAU-202ENST00000434372 533 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC52A1Q9NWF4 AC006529.1-201ENST00000459978 637 ntBASIC20.7■□□□□ 0.9
SLC52A1Q9NWF4 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC20.7■□□□□ 0.9
SLC52A1Q9NWF4 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC20.7■□□□□ 0.9
SLC52A1Q9NWF4 KRT8P2-201ENST00000556193 944 ntBASIC20.7■□□□□ 0.9
SLC52A1Q9NWF4 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
SLC52A1Q9NWF4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC52A1Q9NWF4 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC52A1Q9NWF4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC20.7■□□□□ 0.9
SLC52A1Q9NWF4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC52A1Q9NWF4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SLC52A1Q9NWF4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SLC52A1Q9NWF4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 RN7SL788P-201ENST00000460504 316 ntBASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 GAS7-216ENST00000583882 553 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 AC104506.1-201ENST00000609247 429 ntBASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC52A1Q9NWF4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 AC145285.5-201ENST00000562217 361 ntBASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 AC006483.2-201ENST00000609813 515 ntBASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 AP001527.2-201ENST00000614441 631 ntBASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 FUCA1P1-201ENST00000374476 1351 ntBASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC20.68■□□□□ 0.9
SLC52A1Q9NWF4 AC008894.3-201ENST00000624324 3103 ntBASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 AC138932.1-201ENST00000534164 6830 ntBASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 AC018442.1-201ENST00000421439 2061 ntBASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms