Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD248Q9HCU0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD248Q9HCU0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD248Q9HCU0 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD248Q9HCU0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 AL138709.1-201ENST00000614840 1693 ntBASIC15.68■□□□□ 0.1
CD248Q9HCU0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 KRT8P44-201ENST00000441609 1350 ntBASIC15.68■□□□□ 0.1
CD248Q9HCU0 AC020907.1-201ENST00000616460 1350 ntBASIC15.68■□□□□ 0.1
CD248Q9HCU0 AC006001.1-201ENST00000325130 474 ntBASIC15.68■□□□□ 0.1
CD248Q9HCU0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD248Q9HCU0 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 ZNF767P-206ENST00000513792 565 ntBASIC15.68■□□□□ 0.1
CD248Q9HCU0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD248Q9HCU0 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD248Q9HCU0 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD248Q9HCU0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD248Q9HCU0 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD248Q9HCU0 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD248Q9HCU0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD248Q9HCU0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD248Q9HCU0 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 YBX1P6-201ENST00000442962 1002 ntBASIC15.67■□□□□ 0.1
CD248Q9HCU0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 RN7SL219P-201ENST00000582872 296 ntBASIC15.67■□□□□ 0.1
CD248Q9HCU0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 AP005019.2-201ENST00000615104 511 ntBASIC15.67■□□□□ 0.1
CD248Q9HCU0 AC009542.2-202ENST00000619004 1067 ntBASIC15.67■□□□□ 0.1
CD248Q9HCU0 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CD248Q9HCU0 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD248Q9HCU0 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CD248Q9HCU0 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms