Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 AC105339.3-201ENST00000560043 636 ntBASIC12.04□□□□□ -0.48
NKX6-2Q9C056 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 AL161645.1-201ENST00000622716 1255 ntBASIC12.04□□□□□ -0.48
NKX6-2Q9C056 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 Z98257.2-202ENST00000641138 1548 ntBASIC12.04□□□□□ -0.48
NKX6-2Q9C056 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 AC125807.2-201ENST00000513358 3514 ntBASIC12.03□□□□□ -0.48
NKX6-2Q9C056 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 AC020910.6-201ENST00000623084 1459 ntBASIC12.03□□□□□ -0.48
NKX6-2Q9C056 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 AC012617.1-204ENST00000586340 2305 ntBASIC12.03□□□□□ -0.48
NKX6-2Q9C056 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 REXO1L1P-201ENST00000379010 6598 ntBASIC12.03□□□□□ -0.48
NKX6-2Q9C056 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 SAPCD2P3-201ENST00000455031 850 ntBASIC12.03□□□□□ -0.48
NKX6-2Q9C056 AC073648.2-201ENST00000510116 352 ntBASIC12.03□□□□□ -0.48
NKX6-2Q9C056 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 AL049597.2-201ENST00000565575 961 ntBASIC12.03□□□□□ -0.48
NKX6-2Q9C056 AC061975.2-201ENST00000581722 295 ntBASIC12.03□□□□□ -0.48
NKX6-2Q9C056 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NKX6-2Q9C056 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms