Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.43□□□□□ -0.42
CCL13Q99616 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL13Q99616 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL13Q99616 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.43□□□□□ -0.42
CCL13Q99616 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CCL13Q99616 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CCL13Q99616 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.43□□□□□ -0.42
CCL13Q99616 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CCL13Q99616 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.43□□□□□ -0.42
CCL13Q99616 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 YBX1P6-201ENST00000442962 1002 ntBASIC12.43□□□□□ -0.42
CCL13Q99616 BNIP3P42-201ENST00000454982 569 ntBASIC12.43□□□□□ -0.42
CCL13Q99616 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.43□□□□□ -0.42
CCL13Q99616 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.43□□□□□ -0.42
CCL13Q99616 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL13Q99616 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL13Q99616 AC131206.1-201ENST00000538078 1211 ntBASIC12.43□□□□□ -0.42
CCL13Q99616 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 BNIP3P29-201ENST00000598302 571 ntBASIC12.43□□□□□ -0.42
CCL13Q99616 AC011447.5-201ENST00000616168 564 ntBASIC12.43□□□□□ -0.42
CCL13Q99616 AC002472.3-201ENST00000640124 621 ntBASIC12.43□□□□□ -0.42
CCL13Q99616 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
CCL13Q99616 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL13Q99616 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CCL13Q99616 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CCL13Q99616 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CCL13Q99616 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CCL13Q99616 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
CCL13Q99616 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CCL13Q99616 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 AL390755.1-201ENST00000623716 2027 ntBASIC12.42□□□□□ -0.42
CCL13Q99616 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CCL13Q99616 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 AC092135.3-201ENST00000624151 1846 ntBASIC12.42□□□□□ -0.42
CCL13Q99616 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CCL13Q99616 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CCL13Q99616 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CCL13Q99616 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL13Q99616 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL13Q99616 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
CCL13Q99616 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
CCL13Q99616 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL13Q99616 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.42□□□□□ -0.42
CCL13Q99616 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CCL13Q99616 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.42□□□□□ -0.42
CCL13Q99616 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL13Q99616 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CCL13Q99616 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL13Q99616 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL13Q99616 FAM21FP-201ENST00000426241 1131 ntBASIC12.42□□□□□ -0.42
CCL13Q99616 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.42□□□□□ -0.42
CCL13Q99616 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL13Q99616 CNN2P10-201ENST00000443067 918 ntBASIC12.42□□□□□ -0.42
CCL13Q99616 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL13Q99616 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.42□□□□□ -0.42
CCL13Q99616 C2orf69P2-201ENST00000562032 1123 ntBASIC12.42□□□□□ -0.42
CCL13Q99616 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL13Q99616 MIR4741-201ENST00000579822 90 ntBASIC12.42□□□□□ -0.42
CCL13Q99616 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.42□□□□□ -0.42
CCL13Q99616 AL359881.2-201ENST00000602973 570 ntBASIC12.42□□□□□ -0.42
CCL13Q99616 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL13Q99616 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms