Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 KRT8P22-201ENST00000562317 1415 ntBASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 AGGF1P1-201ENST00000509500 2073 ntBASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 AC093004.1-201ENST00000508850 424 ntBASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 RRP7BP-205ENST00000566851 833 ntBASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 AL360270.3-201ENST00000609118 1348 ntBASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTN4IP1Q8WWV3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 GNAQP1-201ENST00000444815 1067 ntBASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 TSPY16P-201ENST00000449843 468 ntBASIC12.53□□□□□ -0.4
RTN4IP1Q8WWV3 FAM86LP-201ENST00000478302 853 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms