Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.35■□□□□ 0.37
STAG1Q8WVM7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 RNMTL1P1-201ENST00000454103 560 ntBASIC17.35■□□□□ 0.37
STAG1Q8WVM7 AKR7A2P1-201ENST00000460134 915 ntBASIC17.35■□□□□ 0.37
STAG1Q8WVM7 AC021723.1-201ENST00000486306 515 ntBASIC17.35■□□□□ 0.37
STAG1Q8WVM7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.35■□□□□ 0.37
STAG1Q8WVM7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.35■□□□□ 0.37
STAG1Q8WVM7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 AC068587.6-202ENST00000641839 5619 ntBASIC17.35■□□□□ 0.37
STAG1Q8WVM7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
STAG1Q8WVM7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 BCYRN1-201ENST00000418539 200 ntBASIC17.34■□□□□ 0.37
STAG1Q8WVM7 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 AC027237.1-201ENST00000560942 655 ntBASIC17.34■□□□□ 0.37
STAG1Q8WVM7 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 AC005962.1-201ENST00000584100 773 ntBASIC17.34■□□□□ 0.37
STAG1Q8WVM7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 AC009884.2-201ENST00000603110 324 ntBASIC17.34■□□□□ 0.37
STAG1Q8WVM7 MIR6074-201ENST00000612054 107 ntBASIC17.34■□□□□ 0.37
STAG1Q8WVM7 AP000346.4-201ENST00000614827 381 ntBASIC17.34■□□□□ 0.37
STAG1Q8WVM7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
STAG1Q8WVM7 AC097359.2-201ENST00000604992 2389 ntBASIC17.33■□□□□ 0.37
STAG1Q8WVM7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
STAG1Q8WVM7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
STAG1Q8WVM7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
STAG1Q8WVM7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
STAG1Q8WVM7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
STAG1Q8WVM7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
STAG1Q8WVM7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
STAG1Q8WVM7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
STAG1Q8WVM7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
STAG1Q8WVM7 AC138028.6-201ENST00000616106 1482 ntBASIC17.33■□□□□ 0.37
STAG1Q8WVM7 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
STAG1Q8WVM7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
STAG1Q8WVM7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.33■□□□□ 0.36
STAG1Q8WVM7 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
STAG1Q8WVM7 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
STAG1Q8WVM7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
STAG1Q8WVM7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms