Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 AL121723.1-201ENST00000445194 1519 ntBASIC12.91□□□□□ -0.34
CCDC107Q8WV48 AC015818.8-201ENST00000587907 1519 ntBASIC12.91□□□□□ -0.34
CCDC107Q8WV48 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 AL591122.2-201ENST00000624125 1853 ntBASIC12.91□□□□□ -0.34
CCDC107Q8WV48 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC107Q8WV48 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 KRT8P24-201ENST00000560290 1559 ntBASIC12.9□□□□□ -0.34
CCDC107Q8WV48 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 TREML5P-201ENST00000421694 576 ntBASIC12.9□□□□□ -0.34
CCDC107Q8WV48 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 FAM86GP-201ENST00000448322 971 ntBASIC12.9□□□□□ -0.34
CCDC107Q8WV48 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 SDHAP3-202ENST00000515467 728 ntBASIC12.9□□□□□ -0.34
CCDC107Q8WV48 AC022447.6-201ENST00000515522 438 ntBASIC12.9□□□□□ -0.34
CCDC107Q8WV48 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 IGHV3-42-201ENST00000520410 361 ntBASIC12.9□□□□□ -0.34
CCDC107Q8WV48 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 AC130686.1-201ENST00000622936 2466 ntBASIC12.9□□□□□ -0.34
CCDC107Q8WV48 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.9□□□□□ -0.34
CCDC107Q8WV48 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CCDC107Q8WV48 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CCDC107Q8WV48 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
CCDC107Q8WV48 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CCDC107Q8WV48 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCDC107Q8WV48 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms