Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC17.6■□□□□ 0.41
SNED1Q8TER0 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 FAM86B3P-203ENST00000523992 854 ntBASIC17.6■□□□□ 0.41
SNED1Q8TER0 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 USB1-205ENST00000561743 1135 ntTSL 3 BASIC17.6■□□□□ 0.41
SNED1Q8TER0 NDUFB10P1-201ENST00000567319 521 ntBASIC17.6■□□□□ 0.41
SNED1Q8TER0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SNED1Q8TER0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SNED1Q8TER0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC17.6■□□□□ 0.41
SNED1Q8TER0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SNED1Q8TER0 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.6■□□□□ 0.41
SNED1Q8TER0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.6■□□□□ 0.41
SNED1Q8TER0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNED1Q8TER0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNED1Q8TER0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNED1Q8TER0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNED1Q8TER0 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNED1Q8TER0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 AC126177.1-201ENST00000547829 2218 ntBASIC17.59■□□□□ 0.41
SNED1Q8TER0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNED1Q8TER0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNED1Q8TER0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNED1Q8TER0 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 NME4-203ENST00000397722 1232 ntTSL 2 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 AC098934.1-203ENST00000442868 1262 ntBASIC17.59■□□□□ 0.41
SNED1Q8TER0 AC244197.1-201ENST00000456494 951 ntBASIC17.59■□□□□ 0.41
SNED1Q8TER0 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNED1Q8TER0 AL591471.1-201ENST00000621855 229 ntBASIC17.59■□□□□ 0.41
SNED1Q8TER0 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNED1Q8TER0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNED1Q8TER0 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNED1Q8TER0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNED1Q8TER0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNED1Q8TER0 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNED1Q8TER0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNED1Q8TER0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.59■□□□□ 0.41
SNED1Q8TER0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNED1Q8TER0 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SNED1Q8TER0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNED1Q8TER0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
SNED1Q8TER0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNED1Q8TER0 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SNED1Q8TER0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SNED1Q8TER0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
SNED1Q8TER0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNED1Q8TER0 SURF4-203ENST00000371991 715 ntTSL 3 BASIC17.58■□□□□ 0.41
SNED1Q8TER0 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC17.58■□□□□ 0.41
SNED1Q8TER0 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC17.58■□□□□ 0.41
SNED1Q8TER0 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC17.58■□□□□ 0.41
SNED1Q8TER0 SCARNA12-201ENST00000459155 270 ntBASIC17.58■□□□□ 0.41
SNED1Q8TER0 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNED1Q8TER0 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC17.58■□□□□ 0.41
SNED1Q8TER0 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC17.58■□□□□ 0.41
SNED1Q8TER0 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
SNED1Q8TER0 LINC00244-201ENST00000625073 613 ntBASIC17.58■□□□□ 0.41
SNED1Q8TER0 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNED1Q8TER0 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNED1Q8TER0 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNED1Q8TER0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNED1Q8TER0 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNED1Q8TER0 HYMAI-201ENST00000635591 3347 ntBASIC17.58■□□□□ 0.4
SNED1Q8TER0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.58■□□□□ 0.4
SNED1Q8TER0 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNED1Q8TER0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
SNED1Q8TER0 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms