Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 AC022447.6-201ENST00000515522 438 ntBASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 RN7SL163P-201ENST00000583100 276 ntBASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 AL645939.5-201ENST00000606834 243 ntBASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 AC215219.1-201ENST00000400706 1817 ntBASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ARHGEF39Q8N4T4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 AC138028.6-201ENST00000616106 1482 ntBASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 MARK2P5-201ENST00000507649 634 ntBASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 AC022217.1-201ENST00000521069 738 ntBASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 AC013355.1-201ENST00000562625 723 ntBASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 AC090164.2-201ENST00000611487 516 ntBASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 AC106881.1-201ENST00000605849 3329 ntBASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ARHGEF39Q8N4T4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms