Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 AC090857.1-201ENST00000527400 390 ntBASIC15.74■□□□□ 0.11
RNF135Q8IUD6 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RNF135Q8IUD6 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 C18orf15-201ENST00000623680 2534 ntBASIC15.73■□□□□ 0.11
RNF135Q8IUD6 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 AL136309.1-201ENST00000403917 691 ntBASIC15.73■□□□□ 0.11
RNF135Q8IUD6 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 PUDPP3-201ENST00000445368 636 ntBASIC15.73■□□□□ 0.11
RNF135Q8IUD6 RPL7P35-201ENST00000446943 740 ntBASIC15.73■□□□□ 0.11
RNF135Q8IUD6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 RPL18P13-201ENST00000478088 569 ntBASIC15.73■□□□□ 0.11
RNF135Q8IUD6 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 AC106820.3-201ENST00000561653 397 ntBASIC15.73■□□□□ 0.11
RNF135Q8IUD6 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 AC090164.2-201ENST00000611487 516 ntBASIC15.73■□□□□ 0.11
RNF135Q8IUD6 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms