Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 MRPL37P1-201ENST00000592451 1337 ntBASIC15.44■□□□□ 0.06
RFX6Q8HWS3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 BAATP1-201ENST00000412284 1225 ntBASIC15.44■□□□□ 0.06
RFX6Q8HWS3 AC245100.3-201ENST00000441281 285 ntBASIC15.44■□□□□ 0.06
RFX6Q8HWS3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 AC012441.1-201ENST00000446669 685 ntBASIC15.44■□□□□ 0.06
RFX6Q8HWS3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.44■□□□□ 0.06
RFX6Q8HWS3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 AP006294.1-201ENST00000415407 339 ntBASIC15.43■□□□□ 0.06
RFX6Q8HWS3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 ACTG1P3-201ENST00000431775 1114 ntBASIC15.43■□□□□ 0.06
RFX6Q8HWS3 CRB3P1-201ENST00000449338 276 ntBASIC15.43■□□□□ 0.06
RFX6Q8HWS3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 AC068587.3-201ENST00000526613 355 ntBASIC15.43■□□□□ 0.06
RFX6Q8HWS3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 MIR5189-201ENST00000577370 114 ntBASIC15.43■□□□□ 0.06
RFX6Q8HWS3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 AC010319.3-201ENST00000597028 470 ntBASIC15.43■□□□□ 0.06
RFX6Q8HWS3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 AC011840.2-201ENST00000563063 1520 ntBASIC15.43■□□□□ 0.06
RFX6Q8HWS3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX6Q8HWS3 CLUHP2-201ENST00000426660 1303 ntBASIC15.43■□□□□ 0.06
RFX6Q8HWS3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RFX6Q8HWS3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms