Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 AC138761.1-201ENST00000584393 385 ntBASIC13.79□□□□□ -0.2
TUBA1AQ71U36 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.79□□□□□ -0.2
TUBA1AQ71U36 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.78□□□□□ -0.2
TUBA1AQ71U36 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 AOC4P-203ENST00000566825 2289 ntBASIC13.78□□□□□ -0.2
TUBA1AQ71U36 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 AC004945.1-201ENST00000416738 983 ntBASIC13.78□□□□□ -0.2
TUBA1AQ71U36 FAM207CP-201ENST00000443486 507 ntBASIC13.78□□□□□ -0.2
TUBA1AQ71U36 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 TPRX2P-201ENST00000535362 881 ntBASIC13.78□□□□□ -0.2
TUBA1AQ71U36 AC023310.3-201ENST00000557027 670 ntBASIC13.78□□□□□ -0.2
TUBA1AQ71U36 AC100756.1-201ENST00000562736 682 ntBASIC13.78□□□□□ -0.2
TUBA1AQ71U36 AC138749.3-201ENST00000567691 622 ntBASIC13.78□□□□□ -0.2
TUBA1AQ71U36 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 MIR3197-201ENST00000582241 73 ntBASIC13.78□□□□□ -0.2
TUBA1AQ71U36 AL132655.2-201ENST00000596276 594 ntBASIC13.78□□□□□ -0.2
TUBA1AQ71U36 AC116165.1-201ENST00000611806 668 ntBASIC13.78□□□□□ -0.2
TUBA1AQ71U36 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 KRT8P24-201ENST00000560290 1559 ntBASIC13.78□□□□□ -0.2
TUBA1AQ71U36 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 DNM1P41-201ENST00000623634 3350 ntBASIC13.78□□□□□ -0.2
TUBA1AQ71U36 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TUBA1AQ71U36 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
TUBA1AQ71U36 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
TUBA1AQ71U36 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
TUBA1AQ71U36 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.77□□□□□ -0.2
TUBA1AQ71U36 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
TUBA1AQ71U36 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
TUBA1AQ71U36 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TUBA1AQ71U36 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 RPL13P2-201ENST00000440687 659 ntBASIC13.77□□□□□ -0.21
TUBA1AQ71U36 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 SLED1-202ENST00000512051 380 ntBASIC13.77□□□□□ -0.21
TUBA1AQ71U36 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms