Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.22□□□□□ -0.61
MRPL54Q6P161 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 AP002761.4-201ENST00000565433 3361 ntBASIC11.22□□□□□ -0.61
MRPL54Q6P161 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 RN7SL832P-201ENST00000607781 1756 ntBASIC11.22□□□□□ -0.61
MRPL54Q6P161 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
MRPL54Q6P161 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
MRPL54Q6P161 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL54Q6P161 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL54Q6P161 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL54Q6P161 API5-203ENST00000455725 2257 ntTSL 2 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL54Q6P161 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL54Q6P161 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL54Q6P161 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL54Q6P161 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
MRPL54Q6P161 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms