Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 AC004233.3-201ENST00000607794 1269 ntBASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 AL161772.1-201ENST00000610494 4412 ntBASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKAL1Q5VV42 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 TSPY16P-201ENST00000449843 468 ntBASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 AC106820.3-201ENST00000561653 397 ntBASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 AC104506.1-201ENST00000609247 429 ntBASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 AJ011932.1-201ENST00000621707 465 ntBASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 AC072061.1-201ENST00000569710 2234 ntBASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 AC073548.1-201ENST00000624088 1882 ntBASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC16.12■□□□□ 0.17
CDKAL1Q5VV42 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKAL1Q5VV42 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKAL1Q5VV42 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDKAL1Q5VV42 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKAL1Q5VV42 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.11■□□□□ 0.17
CDKAL1Q5VV42 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKAL1Q5VV42 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKAL1Q5VV42 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDKAL1Q5VV42 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKAL1Q5VV42 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKAL1Q5VV42 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms