Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 FAM90A7P-201ENST00000382628 1395 ntBASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 FAM90A23P-201ENST00000400136 1395 ntBASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 AC097065.1-201ENST00000425737 517 ntBASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 AC026434.2-201ENST00000506094 1078 ntBASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 AP002803.1-201ENST00000528836 498 ntBASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 AC026803.1-201ENST00000569130 274 ntBASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.8■□□□□ 0.12
CTC1Q2NKJ3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTC1Q2NKJ3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTC1Q2NKJ3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms