Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
UBA52P62987 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBA52P62987 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.9□□□□□ -0.34
UBA52P62987 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
UBA52P62987 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.9□□□□□ -0.34
UBA52P62987 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.9□□□□□ -0.34
UBA52P62987 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
UBA52P62987 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.9□□□□□ -0.34
UBA52P62987 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
UBA52P62987 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
UBA52P62987 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.9□□□□□ -0.34
UBA52P62987 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.9□□□□□ -0.34
UBA52P62987 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.9□□□□□ -0.34
UBA52P62987 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.9□□□□□ -0.34
UBA52P62987 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.9□□□□□ -0.34
UBA52P62987 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.9□□□□□ -0.34
UBA52P62987 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.9□□□□□ -0.34
UBA52P62987 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.9□□□□□ -0.34
UBA52P62987 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.9□□□□□ -0.34
UBA52P62987 RRP7BP-205ENST00000566851 833 ntBASIC12.9□□□□□ -0.34
UBA52P62987 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
UBA52P62987 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.9□□□□□ -0.34
UBA52P62987 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.9□□□□□ -0.34
UBA52P62987 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.9□□□□□ -0.34
UBA52P62987 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.9□□□□□ -0.34
UBA52P62987 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
UBA52P62987 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
UBA52P62987 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.9□□□□□ -0.34
UBA52P62987 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
UBA52P62987 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
UBA52P62987 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.9□□□□□ -0.34
UBA52P62987 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.9□□□□□ -0.34
UBA52P62987 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBA52P62987 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.9□□□□□ -0.35
UBA52P62987 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.9□□□□□ -0.35
UBA52P62987 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.9□□□□□ -0.35
UBA52P62987 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
UBA52P62987 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
UBA52P62987 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
UBA52P62987 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.89□□□□□ -0.35
UBA52P62987 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
UBA52P62987 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
UBA52P62987 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
UBA52P62987 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.89□□□□□ -0.35
UBA52P62987 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
UBA52P62987 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.89□□□□□ -0.35
UBA52P62987 AC015802.1-201ENST00000588104 1449 ntBASIC12.89□□□□□ -0.35
UBA52P62987 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.89□□□□□ -0.35
UBA52P62987 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 ACE3P-201ENST00000423435 1973 ntBASIC12.89□□□□□ -0.35
UBA52P62987 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.89□□□□□ -0.35
UBA52P62987 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
UBA52P62987 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
UBA52P62987 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.89□□□□□ -0.35
UBA52P62987 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.89□□□□□ -0.35
UBA52P62987 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
UBA52P62987 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBA52P62987 TMEM14DP-201ENST00000422205 345 ntBASIC12.89□□□□□ -0.35
UBA52P62987 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.89□□□□□ -0.35
UBA52P62987 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms