Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDC42P60953 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CDC42P60953 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
CDC42P60953 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDC42P60953 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 MIR574-201ENST00000385209 96 ntBASIC13.6□□□□□ -0.23
CDC42P60953 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.6□□□□□ -0.23
CDC42P60953 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.6□□□□□ -0.23
CDC42P60953 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.6□□□□□ -0.23
CDC42P60953 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.6□□□□□ -0.23
CDC42P60953 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CDC42P60953 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.6□□□□□ -0.23
CDC42P60953 RN7SL618P-201ENST00000477850 296 ntBASIC13.6□□□□□ -0.23
CDC42P60953 SDHAP3-202ENST00000515467 728 ntBASIC13.6□□□□□ -0.23
CDC42P60953 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.6□□□□□ -0.23
CDC42P60953 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.6□□□□□ -0.23
CDC42P60953 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.6□□□□□ -0.23
CDC42P60953 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDC42P60953 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.6□□□□□ -0.23
CDC42P60953 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.6□□□□□ -0.23
CDC42P60953 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.6□□□□□ -0.23
CDC42P60953 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.6□□□□□ -0.23
CDC42P60953 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 MIR6074-201ENST00000612054 107 ntBASIC13.6□□□□□ -0.23
CDC42P60953 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 MEX3B-202ENST00000558133 4333 ntBASIC13.6□□□□□ -0.23
CDC42P60953 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDC42P60953 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.6□□□□□ -0.23
CDC42P60953 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.6□□□□□ -0.23
CDC42P60953 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CDC42P60953 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42P60953 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.6□□□□□ -0.23
CDC42P60953 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
CDC42P60953 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.59□□□□□ -0.23
CDC42P60953 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 CICP16-201ENST00000502609 2813 ntBASIC13.59□□□□□ -0.23
CDC42P60953 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CDC42P60953 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.59□□□□□ -0.23
CDC42P60953 MIR940-201ENST00000401276 94 ntBASIC13.59□□□□□ -0.23
CDC42P60953 RPL37AP1-201ENST00000412502 279 ntBASIC13.59□□□□□ -0.23
CDC42P60953 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.59□□□□□ -0.23
CDC42P60953 ALG1L5P-201ENST00000482043 771 ntBASIC13.59□□□□□ -0.23
CDC42P60953 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
CDC42P60953 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.59□□□□□ -0.23
CDC42P60953 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.59□□□□□ -0.23
CDC42P60953 AL109936.8-201ENST00000641772 604 ntBASIC13.59□□□□□ -0.23
CDC42P60953 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CDC42P60953 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.59□□□□□ -0.23
CDC42P60953 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.59□□□□□ -0.23
CDC42P60953 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.59□□□□□ -0.23
CDC42P60953 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42P60953 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.59□□□□□ -0.23
CDC42P60953 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms