Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GFRA1P56159 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.21□□□□□ -0.29
GFRA1P56159 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFRA1P56159 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
GFRA1P56159 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFRA1P56159 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFRA1P56159 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFRA1P56159 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
GFRA1P56159 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFRA1P56159 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GFRA1P56159 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GFRA1P56159 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.21□□□□□ -0.29
GFRA1P56159 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.21□□□□□ -0.29
GFRA1P56159 AC006122.1-201ENST00000493323 440 ntBASIC13.21□□□□□ -0.29
GFRA1P56159 HIST2H2BC-201ENST00000498492 580 ntBASIC13.21□□□□□ -0.29
GFRA1P56159 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.21□□□□□ -0.29
GFRA1P56159 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.21□□□□□ -0.29
GFRA1P56159 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.21□□□□□ -0.29
GFRA1P56159 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.21□□□□□ -0.29
GFRA1P56159 RBM8B-201ENST00000555532 525 ntBASIC13.21□□□□□ -0.29
GFRA1P56159 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.21□□□□□ -0.29
GFRA1P56159 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.21□□□□□ -0.29
GFRA1P56159 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.21□□□□□ -0.29
GFRA1P56159 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.21□□□□□ -0.29
GFRA1P56159 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GFRA1P56159 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GFRA1P56159 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
GFRA1P56159 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.21□□□□□ -0.29
GFRA1P56159 AL132994.2-201ENST00000603120 687 ntBASIC13.21□□□□□ -0.29
GFRA1P56159 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.21□□□□□ -0.29
GFRA1P56159 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFRA1P56159 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFRA1P56159 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GFRA1P56159 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFRA1P56159 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
GFRA1P56159 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.21□□□□□ -0.29
GFRA1P56159 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
GFRA1P56159 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
GFRA1P56159 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GFRA1P56159 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
GFRA1P56159 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GFRA1P56159 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
GFRA1P56159 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.21□□□□□ -0.3
GFRA1P56159 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.21□□□□□ -0.3
GFRA1P56159 AC136759.1-202ENST00000530858 2194 ntBASIC13.21□□□□□ -0.3
GFRA1P56159 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
GFRA1P56159 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GFRA1P56159 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.21□□□□□ -0.3
GFRA1P56159 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.21□□□□□ -0.3
GFRA1P56159 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.21□□□□□ -0.3
GFRA1P56159 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
GFRA1P56159 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GFRA1P56159 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GFRA1P56159 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
GFRA1P56159 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.2□□□□□ -0.3
GFRA1P56159 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
GFRA1P56159 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
GFRA1P56159 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 TUBBP5-203ENST00000508529 1334 ntBASIC13.2□□□□□ -0.3
GFRA1P56159 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.2□□□□□ -0.3
GFRA1P56159 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.2□□□□□ -0.3
GFRA1P56159 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.2□□□□□ -0.3
GFRA1P56159 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.2□□□□□ -0.3
GFRA1P56159 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.2□□□□□ -0.3
GFRA1P56159 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.2□□□□□ -0.3
GFRA1P56159 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
GFRA1P56159 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.2□□□□□ -0.3
GFRA1P56159 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.2□□□□□ -0.3
GFRA1P56159 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.2□□□□□ -0.3
GFRA1P56159 AL008707.1-201ENST00000422498 534 ntBASIC13.2□□□□□ -0.3
GFRA1P56159 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.2□□□□□ -0.3
GFRA1P56159 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.2□□□□□ -0.3
GFRA1P56159 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFRA1P56159 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.2□□□□□ -0.3
GFRA1P56159 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.2□□□□□ -0.3
GFRA1P56159 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.2□□□□□ -0.3
GFRA1P56159 AC009779.1-201ENST00000551138 283 ntBASIC13.2□□□□□ -0.3
GFRA1P56159 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.2□□□□□ -0.3
GFRA1P56159 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.2□□□□□ -0.3
GFRA1P56159 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.2□□□□□ -0.3
GFRA1P56159 NDUFV2P1-201ENST00000596415 907 ntBASIC13.2□□□□□ -0.3
GFRA1P56159 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
GFRA1P56159 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.2□□□□□ -0.3
GFRA1P56159 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
GFRA1P56159 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms