Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.08■□□□□ 0
CDH4P55283 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CDH4P55283 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CDH4P55283 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH4P55283 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH4P55283 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH4P55283 AL596257.1-201ENST00000641463 2694 ntBASIC15.08■□□□□ 0
CDH4P55283 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CDH4P55283 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH4P55283 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH4P55283 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH4P55283 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH4P55283 AC113367.3-201ENST00000508316 1912 ntBASIC15.07■□□□□ 0
CDH4P55283 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CDH4P55283 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CDH4P55283 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.07■□□□□ 0
CDH4P55283 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CDH4P55283 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH4P55283 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
CDH4P55283 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH4P55283 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH4P55283 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CDH4P55283 MYADML-201ENST00000474610 2147 ntBASIC15.07■□□□□ 0
CDH4P55283 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH4P55283 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH4P55283 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.07■□□□□ 0
CDH4P55283 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.07■□□□□ 0
CDH4P55283 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
CDH4P55283 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.07■□□□□ 0
CDH4P55283 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.07■□□□□ 0
CDH4P55283 KRT8P13-201ENST00000463294 1010 ntBASIC15.07■□□□□ 0
CDH4P55283 AC091804.1-201ENST00000486888 567 ntBASIC15.07■□□□□ 0
CDH4P55283 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.07■□□□□ 0
CDH4P55283 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.07■□□□□ 0
CDH4P55283 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.07■□□□□ 0
CDH4P55283 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.07■□□□□ 0
CDH4P55283 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.07■□□□□ 0
CDH4P55283 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CDH4P55283 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.07■□□□□ 0
CDH4P55283 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.07■□□□□ 0
CDH4P55283 AC004923.1-202ENST00000642106 209 ntBASIC15.07■□□□□ 0
CDH4P55283 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.07■□□□□ 0
CDH4P55283 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH4P55283 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CDH4P55283 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.07■□□□□ 0
CDH4P55283 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.07■□□□□ 0
CDH4P55283 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH4P55283 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH4P55283 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CDH4P55283 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.07■□□□□ 0
CDH4P55283 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH4P55283 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CDH4P55283 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH4P55283 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.07■□□□□ 0
CDH4P55283 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CDH4P55283 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH4P55283 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH4P55283 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CDH4P55283 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.06■□□□□ 0
CDH4P55283 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH4P55283 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH4P55283 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH4P55283 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH4P55283 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CDH4P55283 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.06■□□□□ 0
CDH4P55283 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.06■□□□□ 0
CDH4P55283 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CDH4P55283 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.06■□□□□ 0
CDH4P55283 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH4P55283 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.06■□□□□ 0
CDH4P55283 DPM3-202ENST00000368399 517 ntBASIC15.06■□□□□ 0
CDH4P55283 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CDH4P55283 GPAA1P2-201ENST00000417923 928 ntBASIC15.06■□□□□ 0
CDH4P55283 RPL18P13-201ENST00000478088 569 ntBASIC15.06■□□□□ 0
CDH4P55283 AC106794.1-201ENST00000506935 792 ntBASIC15.06■□□□□ 0
CDH4P55283 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.06■□□□□ 0
CDH4P55283 AC005740.2-201ENST00000511085 419 ntBASIC15.06■□□□□ 0
CDH4P55283 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH4P55283 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.06■□□□□ 0
CDH4P55283 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.06■□□□□ 0
CDH4P55283 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH4P55283 RBM8B-201ENST00000555532 525 ntBASIC15.06■□□□□ 0
CDH4P55283 AC005962.1-201ENST00000584100 773 ntBASIC15.06■□□□□ 0
CDH4P55283 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CDH4P55283 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CDH4P55283 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
CDH4P55283 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH4P55283 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH4P55283 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH4P55283 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH4P55283 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH4P55283 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CDH4P55283 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.06■□□□□ 0
CDH4P55283 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH4P55283 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CDH4P55283 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH4P55283 AC007326.2-201ENST00000624224 7579 ntBASIC15.06■□□□□ 0
CDH4P55283 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.06■□□□□ 0
CDH4P55283 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.06■□□□□ 0
CDH4P55283 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms