Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 Z69890.1-201ENST00000382990 339 ntBASIC14.57□□□□□ -0.08
LIMK1P53667 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LIMK1P53667 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC14.57□□□□□ -0.08
LIMK1P53667 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.57□□□□□ -0.08
LIMK1P53667 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.57□□□□□ -0.08
LIMK1P53667 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC14.57□□□□□ -0.08
LIMK1P53667 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.57□□□□□ -0.08
LIMK1P53667 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.57□□□□□ -0.08
LIMK1P53667 SCARNA21-201ENST00000517026 139 ntBASIC14.57□□□□□ -0.08
LIMK1P53667 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC14.57□□□□□ -0.08
LIMK1P53667 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.57□□□□□ -0.08
LIMK1P53667 PHBP15-201ENST00000574228 665 ntBASIC14.57□□□□□ -0.08
LIMK1P53667 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14.57□□□□□ -0.08
LIMK1P53667 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC14.57□□□□□ -0.08
LIMK1P53667 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.57□□□□□ -0.08
LIMK1P53667 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.57□□□□□ -0.08
LIMK1P53667 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LIMK1P53667 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.57□□□□□ -0.08
LIMK1P53667 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.57□□□□□ -0.08
LIMK1P53667 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LIMK1P53667 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.57□□□□□ -0.08
LIMK1P53667 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LIMK1P53667 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LIMK1P53667 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LIMK1P53667 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LIMK1P53667 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK1P53667 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK1P53667 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK1P53667 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK1P53667 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK1P53667 AC091951.1-201ENST00000512854 2465 ntBASIC14.56□□□□□ -0.08
LIMK1P53667 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.56□□□□□ -0.08
LIMK1P53667 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LIMK1P53667 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.56□□□□□ -0.08
LIMK1P53667 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK1P53667 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK1P53667 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK1P53667 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK1P53667 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK1P53667 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.56□□□□□ -0.08
LIMK1P53667 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK1P53667 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.56□□□□□ -0.08
LIMK1P53667 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LIMK1P53667 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC14.56□□□□□ -0.08
LIMK1P53667 AC092638.2-201ENST00000441105 947 ntBASIC14.56□□□□□ -0.08
LIMK1P53667 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.56□□□□□ -0.08
LIMK1P53667 AGPAT5P1-201ENST00000455855 1019 ntBASIC14.56□□□□□ -0.08
LIMK1P53667 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.56□□□□□ -0.08
LIMK1P53667 AC024293.1-201ENST00000467930 498 ntBASIC14.56□□□□□ -0.08
LIMK1P53667 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC14.56□□□□□ -0.08
LIMK1P53667 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.56□□□□□ -0.08
LIMK1P53667 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK1P53667 AC244250.3-201ENST00000620749 366 ntBASIC14.56□□□□□ -0.08
LIMK1P53667 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK1P53667 AC138466.5-201ENST00000624002 808 ntBASIC14.56□□□□□ -0.08
LIMK1P53667 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.56□□□□□ -0.08
LIMK1P53667 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.56□□□□□ -0.08
LIMK1P53667 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LIMK1P53667 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.56□□□□□ -0.08
LIMK1P53667 AC087481.3-201ENST00000602886 1894 ntBASIC14.56□□□□□ -0.08
LIMK1P53667 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LIMK1P53667 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.56□□□□□ -0.08
LIMK1P53667 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK1P53667 AC090616.6-203ENST00000579186 1945 ntBASIC14.56□□□□□ -0.08
LIMK1P53667 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.56□□□□□ -0.08
LIMK1P53667 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LIMK1P53667 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.56□□□□□ -0.08
LIMK1P53667 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK1P53667 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.56□□□□□ -0.08
LIMK1P53667 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK1P53667 AC105250.1-201ENST00000509378 2057 ntBASIC14.56□□□□□ -0.08
LIMK1P53667 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK1P53667 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.56□□□□□ -0.08
LIMK1P53667 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LIMK1P53667 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LIMK1P53667 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK1P53667 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK1P53667 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.55□□□□□ -0.08
LIMK1P53667 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
LIMK1P53667 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LIMK1P53667 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.55□□□□□ -0.08
LIMK1P53667 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK1P53667 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK1P53667 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK1P53667 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK1P53667 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.55□□□□□ -0.08
LIMK1P53667 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms