Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.08□□□□□ -0.32
CX3CR1P49238 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.08□□□□□ -0.32
CX3CR1P49238 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CX3CR1P49238 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.08□□□□□ -0.32
CX3CR1P49238 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.08□□□□□ -0.32
CX3CR1P49238 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CX3CR1P49238 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.08□□□□□ -0.32
CX3CR1P49238 ACTBP8-201ENST00000403258 1108 ntBASIC13.08□□□□□ -0.32
CX3CR1P49238 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.08□□□□□ -0.32
CX3CR1P49238 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.08□□□□□ -0.32
CX3CR1P49238 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.08□□□□□ -0.32
CX3CR1P49238 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CX3CR1P49238 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CX3CR1P49238 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
CX3CR1P49238 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.08□□□□□ -0.32
CX3CR1P49238 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.08□□□□□ -0.32
CX3CR1P49238 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.08□□□□□ -0.32
CX3CR1P49238 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.08□□□□□ -0.32
CX3CR1P49238 CU634019.7-201ENST00000624153 1185 ntBASIC13.08□□□□□ -0.32
CX3CR1P49238 FP236241.2-201ENST00000624906 1185 ntBASIC13.08□□□□□ -0.32
CX3CR1P49238 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.08□□□□□ -0.32
CX3CR1P49238 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 C8orf49-201ENST00000525043 1968 ntBASIC13.08□□□□□ -0.32
CX3CR1P49238 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.08□□□□□ -0.32
CX3CR1P49238 KRT8P35-201ENST00000483942 1338 ntBASIC13.08□□□□□ -0.32
CX3CR1P49238 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.08□□□□□ -0.32
CX3CR1P49238 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CX3CR1P49238 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.08□□□□□ -0.32
CX3CR1P49238 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
CX3CR1P49238 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CX3CR1P49238 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.08□□□□□ -0.32
CX3CR1P49238 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 AGGF1P1-201ENST00000509500 2073 ntBASIC13.08□□□□□ -0.32
CX3CR1P49238 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CX3CR1P49238 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CX3CR1P49238 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CX3CR1P49238 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CX3CR1P49238 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CX3CR1P49238 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CX3CR1P49238 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CX3CR1P49238 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CX3CR1P49238 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CX3CR1P49238 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CX3CR1P49238 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CX3CR1P49238 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CX3CR1P49238 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CX3CR1P49238 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CX3CR1P49238 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CX3CR1P49238 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CX3CR1P49238 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.07□□□□□ -0.32
CX3CR1P49238 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.07□□□□□ -0.32
CX3CR1P49238 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CX3CR1P49238 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CX3CR1P49238 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.07□□□□□ -0.32
CX3CR1P49238 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.07□□□□□ -0.32
CX3CR1P49238 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.07□□□□□ -0.32
CX3CR1P49238 API5-211ENST00000534695 560 ntTSL 5 BASIC13.07□□□□□ -0.32
CX3CR1P49238 AP001063.1-201ENST00000568332 529 ntBASIC13.07□□□□□ -0.32
CX3CR1P49238 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.07□□□□□ -0.32
CX3CR1P49238 AC140912.1-201ENST00000577171 1054 ntBASIC13.07□□□□□ -0.32
CX3CR1P49238 CTBP2P3-201ENST00000585629 1255 ntBASIC13.07□□□□□ -0.32
CX3CR1P49238 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.07□□□□□ -0.32
CX3CR1P49238 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
CX3CR1P49238 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CX3CR1P49238 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CX3CR1P49238 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CX3CR1P49238 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.07□□□□□ -0.32
CX3CR1P49238 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.07□□□□□ -0.32
CX3CR1P49238 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CX3CR1P49238 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CX3CR1P49238 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.07□□□□□ -0.32
CX3CR1P49238 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CX3CR1P49238 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CX3CR1P49238 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CX3CR1P49238 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.07□□□□□ -0.32
CX3CR1P49238 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CX3CR1P49238 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms