Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SERBP1P5-201ENST00000510079 1181 ntBASIC15.88■□□□□ 0.13
SSR1P43307 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.88■□□□□ 0.13
SSR1P43307 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.88■□□□□ 0.13
SSR1P43307 AC123567.1-201ENST00000548294 1261 ntBASIC15.88■□□□□ 0.13
SSR1P43307 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.88■□□□□ 0.13
SSR1P43307 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.88■□□□□ 0.13
SSR1P43307 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SSR1P43307 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.88■□□□□ 0.13
SSR1P43307 BRI3BPP1-201ENST00000594224 787 ntBASIC15.88■□□□□ 0.13
SSR1P43307 AC093726.1-201ENST00000608064 963 ntBASIC15.88■□□□□ 0.13
SSR1P43307 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SSR1P43307 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.88■□□□□ 0.13
SSR1P43307 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SSR1P43307 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SSR1P43307 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SSR1P43307 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SSR1P43307 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 AC018665.1-201ENST00000622927 1362 ntBASIC15.87■□□□□ 0.13
SSR1P43307 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR1P43307 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSR1P43307 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR1P43307 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR1P43307 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SSR1P43307 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SSR1P43307 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.87■□□□□ 0.13
SSR1P43307 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR1P43307 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSR1P43307 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.87■□□□□ 0.13
SSR1P43307 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSR1P43307 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR1P43307 AL645937.2-201ENST00000396808 931 ntBASIC15.87■□□□□ 0.13
SSR1P43307 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.87■□□□□ 0.13
SSR1P43307 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.87■□□□□ 0.13
SSR1P43307 NUS1P3-201ENST00000423502 862 ntBASIC15.87■□□□□ 0.13
SSR1P43307 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SSR1P43307 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.87■□□□□ 0.13
SSR1P43307 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.87■□□□□ 0.13
SSR1P43307 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.87■□□□□ 0.13
SSR1P43307 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSR1P43307 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.87■□□□□ 0.13
SSR1P43307 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR1P43307 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.87■□□□□ 0.13
SSR1P43307 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
SSR1P43307 AL132655.2-201ENST00000596276 594 ntBASIC15.87■□□□□ 0.13
SSR1P43307 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.87■□□□□ 0.13
SSR1P43307 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.87■□□□□ 0.13
SSR1P43307 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSR1P43307 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR1P43307 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SSR1P43307 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SSR1P43307 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR1P43307 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSR1P43307 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSR1P43307 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SSR1P43307 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSR1P43307 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
SSR1P43307 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR1P43307 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR1P43307 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SSR1P43307 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.86■□□□□ 0.13
SSR1P43307 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR1P43307 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR1P43307 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR1P43307 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.86■□□□□ 0.13
SSR1P43307 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR1P43307 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SSR1P43307 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR1P43307 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR1P43307 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR1P43307 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSR1P43307 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR1P43307 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
SSR1P43307 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.86■□□□□ 0.13
SSR1P43307 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR1P43307 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR1P43307 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.86■□□□□ 0.13
SSR1P43307 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSR1P43307 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SSR1P43307 SOCS2P1-201ENST00000417727 557 ntBASIC15.86■□□□□ 0.13
SSR1P43307 AL359711.2-201ENST00000563105 872 ntBASIC15.86■□□□□ 0.13
SSR1P43307 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.86■□□□□ 0.13
SSR1P43307 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.86■□□□□ 0.13
SSR1P43307 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.86■□□□□ 0.13
SSR1P43307 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.86■□□□□ 0.13
SSR1P43307 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.86■□□□□ 0.13
SSR1P43307 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms