Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC093726.1-201ENST00000608064 963 ntBASIC15.03■□□□□ -0
RPA3P35244 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.03■□□□□ -0
RPA3P35244 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.03■□□□□ -0
RPA3P35244 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.03■□□□□ -0
RPA3P35244 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.03■□□□□ -0
RPA3P35244 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RPA3P35244 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPA3P35244 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.03■□□□□ -0
RPA3P35244 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPA3P35244 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPA3P35244 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.03■□□□□ -0
RPA3P35244 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RPA3P35244 AC027612.1-201ENST00000445234 2395 ntBASIC15.03■□□□□ -0
RPA3P35244 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPA3P35244 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.03■□□□□ -0
RPA3P35244 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
RPA3P35244 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.02■□□□□ -0
RPA3P35244 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPA3P35244 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPA3P35244 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPA3P35244 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPA3P35244 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPA3P35244 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RPA3P35244 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.02■□□□□ -0
RPA3P35244 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPA3P35244 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPA3P35244 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPA3P35244 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.02■□□□□ -0
RPA3P35244 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RPA3P35244 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.02■□□□□ -0
RPA3P35244 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPA3P35244 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
RPA3P35244 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
RPA3P35244 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPA3P35244 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPA3P35244 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
RPA3P35244 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.02■□□□□ -0
RPA3P35244 HLA-K-203ENST00000430151 1046 ntBASIC15.02■□□□□ -0
RPA3P35244 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.02■□□□□ -0
RPA3P35244 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPA3P35244 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.02■□□□□ -0
RPA3P35244 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
RPA3P35244 AC123567.1-201ENST00000548294 1261 ntBASIC15.02■□□□□ -0
RPA3P35244 AC190387.1-201ENST00000551683 408 ntBASIC15.02■□□□□ -0
RPA3P35244 AC138761.1-201ENST00000584393 385 ntBASIC15.02■□□□□ -0
RPA3P35244 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPA3P35244 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.02■□□□□ -0
RPA3P35244 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPA3P35244 AC007431.3-201ENST00000623221 587 ntBASIC15.02■□□□□ -0
RPA3P35244 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RPA3P35244 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.02□□□□□ -0.01
RPA3P35244 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RPA3P35244 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC15.02□□□□□ -0.01
RPA3P35244 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.02□□□□□ -0.01
RPA3P35244 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
RPA3P35244 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RPA3P35244 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.02□□□□□ -0.01
RPA3P35244 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPA3P35244 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
RPA3P35244 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPA3P35244 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.02□□□□□ -0.01
RPA3P35244 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPA3P35244 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.02□□□□□ -0.01
RPA3P35244 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RPA3P35244 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPA3P35244 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPA3P35244 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
RPA3P35244 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RPA3P35244 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.01□□□□□ -0.01
RPA3P35244 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.01□□□□□ -0.01
RPA3P35244 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.01□□□□□ -0.01
RPA3P35244 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.01□□□□□ -0.01
RPA3P35244 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.01□□□□□ -0.01
RPA3P35244 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.01□□□□□ -0.01
RPA3P35244 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RPA3P35244 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.01□□□□□ -0.01
RPA3P35244 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 RPL13AP25-201ENST00000484130 612 ntBASIC15.01□□□□□ -0.01
RPA3P35244 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.01□□□□□ -0.01
RPA3P35244 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.01□□□□□ -0.01
RPA3P35244 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.01□□□□□ -0.01
RPA3P35244 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.01□□□□□ -0.01
RPA3P35244 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.01□□□□□ -0.01
RPA3P35244 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.01□□□□□ -0.01
RPA3P35244 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.01□□□□□ -0.01
RPA3P35244 AC140912.1-201ENST00000577171 1054 ntBASIC15.01□□□□□ -0.01
RPA3P35244 MIR3197-201ENST00000582241 73 ntBASIC15.01□□□□□ -0.01
RPA3P35244 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.01□□□□□ -0.01
RPA3P35244 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms