Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RXRBP28702 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RXRBP28702 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RXRBP28702 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RXRBP28702 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RXRBP28702 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.81■□□□□ 0.6
RXRBP28702 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RXRBP28702 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.8■□□□□ 0.6
RXRBP28702 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RXRBP28702 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RXRBP28702 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.8■□□□□ 0.6
RXRBP28702 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RXRBP28702 PKD1P1-201ENST00000458669 6805 ntBASIC18.8■□□□□ 0.6
RXRBP28702 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
RXRBP28702 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RXRBP28702 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.8■□□□□ 0.6
RXRBP28702 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.8■□□□□ 0.6
RXRBP28702 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC18.8■□□□□ 0.6
RXRBP28702 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RXRBP28702 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RXRBP28702 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RXRBP28702 MIR193A-201ENST00000384882 88 ntBASIC18.8■□□□□ 0.6
RXRBP28702 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RXRBP28702 AC073210.1-201ENST00000414799 232 ntBASIC18.8■□□□□ 0.6
RXRBP28702 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC18.8■□□□□ 0.6
RXRBP28702 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC18.8■□□□□ 0.6
RXRBP28702 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC18.8■□□□□ 0.6
RXRBP28702 AC099343.1-201ENST00000513481 609 ntBASIC18.8■□□□□ 0.6
RXRBP28702 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC18.8■□□□□ 0.6
RXRBP28702 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC18.8■□□□□ 0.6
RXRBP28702 MT3-202ENST00000561640 514 ntTSL 3 BASIC18.8■□□□□ 0.6
RXRBP28702 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC18.8■□□□□ 0.6
RXRBP28702 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RXRBP28702 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
RXRBP28702 AC134878.2-201ENST00000620700 1265 ntBASIC18.8■□□□□ 0.6
RXRBP28702 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC18.8■□□□□ 0.6
RXRBP28702 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RXRBP28702 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RXRBP28702 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.8■□□□□ 0.6
RXRBP28702 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RXRBP28702 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.8■□□□□ 0.6
RXRBP28702 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RXRBP28702 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RXRBP28702 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RXRBP28702 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RXRBP28702 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RXRBP28702 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RXRBP28702 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RXRBP28702 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RXRBP28702 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RXRBP28702 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
RXRBP28702 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
RXRBP28702 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
RXRBP28702 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
RXRBP28702 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RXRBP28702 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RXRBP28702 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RXRBP28702 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC18.79■□□□□ 0.6
RXRBP28702 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RXRBP28702 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RXRBP28702 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.79■□□□□ 0.6
RXRBP28702 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RXRBP28702 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RXRBP28702 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RXRBP28702 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.79■□□□□ 0.6
RXRBP28702 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RXRBP28702 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC18.79■□□□□ 0.6
RXRBP28702 AL121949.1-201ENST00000402043 968 ntBASIC18.79■□□□□ 0.6
RXRBP28702 DNM1P48-201ENST00000419538 439 ntBASIC18.79■□□□□ 0.6
RXRBP28702 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC18.79■□□□□ 0.6
RXRBP28702 OR52V1P-201ENST00000515557 898 ntBASIC18.79■□□□□ 0.6
RXRBP28702 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RXRBP28702 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RXRBP28702 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RXRBP28702 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RXRBP28702 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
RXRBP28702 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC18.79■□□□□ 0.6
RXRBP28702 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RXRBP28702 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.79■□□□□ 0.6
RXRBP28702 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
RXRBP28702 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RXRBP28702 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RXRBP28702 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RXRBP28702 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RXRBP28702 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.78■□□□□ 0.6
RXRBP28702 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RXRBP28702 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RXRBP28702 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RXRBP28702 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC18.78■□□□□ 0.6
RXRBP28702 MIR181D-201ENST00000384853 137 ntBASIC18.78■□□□□ 0.6
RXRBP28702 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RXRBP28702 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RXRBP28702 U3.41-201ENST00000408711 219 ntBASIC18.78■□□□□ 0.6
RXRBP28702 BX679664.3-201ENST00000414070 555 ntBASIC18.78■□□□□ 0.6
RXRBP28702 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC18.78■□□□□ 0.6
RXRBP28702 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC18.78■□□□□ 0.6
RXRBP28702 YY1P2-201ENST00000438766 948 ntBASIC18.78■□□□□ 0.6
RXRBP28702 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RXRBP28702 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC18.78■□□□□ 0.6
RXRBP28702 AC113935.1-201ENST00000471722 555 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms