Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.68□□□□□ -0.06
VARSP26640 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.68□□□□□ -0.06
VARSP26640 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.68□□□□□ -0.06
VARSP26640 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.68□□□□□ -0.06
VARSP26640 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
VARSP26640 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.68□□□□□ -0.06
VARSP26640 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.68□□□□□ -0.06
VARSP26640 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.68□□□□□ -0.06
VARSP26640 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.68□□□□□ -0.06
VARSP26640 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.68□□□□□ -0.06
VARSP26640 MIR4525-201ENST00000580000 75 ntBASIC14.68□□□□□ -0.06
VARSP26640 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.68□□□□□ -0.06
VARSP26640 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.68□□□□□ -0.06
VARSP26640 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.68□□□□□ -0.06
VARSP26640 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.68□□□□□ -0.06
VARSP26640 AC005252.2-201ENST00000624630 1141 ntBASIC14.68□□□□□ -0.06
VARSP26640 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
VARSP26640 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
VARSP26640 AL928921.2-201ENST00000641325 2442 ntBASIC14.68□□□□□ -0.06
VARSP26640 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 AC018442.1-201ENST00000421439 2061 ntBASIC14.68□□□□□ -0.06
VARSP26640 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
VARSP26640 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
VARSP26640 AC113367.3-201ENST00000508316 1912 ntBASIC14.68□□□□□ -0.06
VARSP26640 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.68□□□□□ -0.06
VARSP26640 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
VARSP26640 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.68□□□□□ -0.06
VARSP26640 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VARSP26640 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
VARSP26640 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
VARSP26640 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.67□□□□□ -0.06
VARSP26640 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
VARSP26640 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
VARSP26640 AL133338.1-201ENST00000565695 1517 ntBASIC14.67□□□□□ -0.06
VARSP26640 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.67□□□□□ -0.06
VARSP26640 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.67□□□□□ -0.06
VARSP26640 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.67□□□□□ -0.06
VARSP26640 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
VARSP26640 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
VARSP26640 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
VARSP26640 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
VARSP26640 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.67□□□□□ -0.06
VARSP26640 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
VARSP26640 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
VARSP26640 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.67□□□□□ -0.06
VARSP26640 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.67□□□□□ -0.06
VARSP26640 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.67□□□□□ -0.06
VARSP26640 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.67□□□□□ -0.06
VARSP26640 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.67□□□□□ -0.06
VARSP26640 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.67□□□□□ -0.06
VARSP26640 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
VARSP26640 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
VARSP26640 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
VARSP26640 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.67□□□□□ -0.06
VARSP26640 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.67□□□□□ -0.06
VARSP26640 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.67□□□□□ -0.06
VARSP26640 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.67□□□□□ -0.06
VARSP26640 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
VARSP26640 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.67□□□□□ -0.06
VARSP26640 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
VARSP26640 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.67□□□□□ -0.06
VARSP26640 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
VARSP26640 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.67□□□□□ -0.06
VARSP26640 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.67□□□□□ -0.06
VARSP26640 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.67□□□□□ -0.06
VARSP26640 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
VARSP26640 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VARSP26640 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms