Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 KHSRPP1-201ENST00000427983 1768 ntBASIC15.09■□□□□ 0.01
PTPN3P26045 RN7SL832P-201ENST00000607781 1756 ntBASIC15.09■□□□□ 0.01
PTPN3P26045 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PTPN3P26045 AL354989.2-201ENST00000435838 1540 ntBASIC15.09■□□□□ 0.01
PTPN3P26045 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
PTPN3P26045 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.09■□□□□ 0.01
PTPN3P26045 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 AC006001.1-201ENST00000325130 474 ntBASIC15.09■□□□□ 0.01
PTPN3P26045 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN3P26045 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PTPN3P26045 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 ARSEP1-201ENST00000420443 635 ntBASIC15.09■□□□□ 0.01
PTPN3P26045 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.09■□□□□ 0.01
PTPN3P26045 PUDPP3-201ENST00000445368 636 ntBASIC15.09■□□□□ 0.01
PTPN3P26045 CROCCP4-201ENST00000457096 498 ntBASIC15.09■□□□□ 0.01
PTPN3P26045 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.09■□□□□ 0.01
PTPN3P26045 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
PTPN3P26045 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.09■□□□□ 0.01
PTPN3P26045 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
PTPN3P26045 MIR4683-201ENST00000579659 81 ntBASIC15.09■□□□□ 0.01
PTPN3P26045 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.09■□□□□ 0.01
PTPN3P26045 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PTPN3P26045 AC073413.1-201ENST00000603927 732 ntBASIC15.09■□□□□ 0.01
PTPN3P26045 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN3P26045 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PTPN3P26045 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.09■□□□□ 0.01
PTPN3P26045 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PTPN3P26045 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN3P26045 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PTPN3P26045 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.09■□□□□ 0.01
PTPN3P26045 AC012617.1-204ENST00000586340 2305 ntBASIC15.09■□□□□ 0.01
PTPN3P26045 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.08■□□□□ 0.01
PTPN3P26045 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PTPN3P26045 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.08■□□□□ 0.01
PTPN3P26045 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PTPN3P26045 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
PTPN3P26045 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
PTPN3P26045 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.08■□□□□ 0.01
PTPN3P26045 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PTPN3P26045 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PTPN3P26045 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PTPN3P26045 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PTPN3P26045 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PTPN3P26045 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
PTPN3P26045 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.08■□□□□ 0
PTPN3P26045 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
PTPN3P26045 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN3P26045 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.08■□□□□ 0
PTPN3P26045 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN3P26045 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN3P26045 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN3P26045 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN3P26045 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PTPN3P26045 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.08■□□□□ 0
PTPN3P26045 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.08■□□□□ 0
PTPN3P26045 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.08■□□□□ 0
PTPN3P26045 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.08■□□□□ 0
PTPN3P26045 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.08■□□□□ 0
PTPN3P26045 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.08■□□□□ 0
PTPN3P26045 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
PTPN3P26045 KRT43P-201ENST00000434019 910 ntBASIC15.08■□□□□ 0
PTPN3P26045 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PTPN3P26045 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
PTPN3P26045 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.08■□□□□ 0
PTPN3P26045 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.08■□□□□ 0
PTPN3P26045 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
PTPN3P26045 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.08■□□□□ 0
PTPN3P26045 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.08■□□□□ 0
PTPN3P26045 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.08■□□□□ 0
PTPN3P26045 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.08■□□□□ 0
PTPN3P26045 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.08■□□□□ 0
PTPN3P26045 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.08■□□□□ 0
PTPN3P26045 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.08■□□□□ 0
PTPN3P26045 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.08■□□□□ 0
PTPN3P26045 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.08■□□□□ 0
PTPN3P26045 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.08■□□□□ 0
PTPN3P26045 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.08■□□□□ 0
PTPN3P26045 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.08■□□□□ 0
PTPN3P26045 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.08■□□□□ 0
PTPN3P26045 AC002472.3-201ENST00000640124 621 ntBASIC15.08■□□□□ 0
PTPN3P26045 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN3P26045 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.08■□□□□ 0
PTPN3P26045 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN3P26045 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN3P26045 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN3P26045 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN3P26045 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms