Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
MMP11P24347 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
MMP11P24347 AL137783.1-201ENST00000623494 1896 ntBASIC14.08□□□□□ -0.16
MMP11P24347 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 AC097359.2-201ENST00000604992 2389 ntBASIC14.08□□□□□ -0.16
MMP11P24347 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.08□□□□□ -0.16
MMP11P24347 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 CHMP1AP1-201ENST00000445563 662 ntBASIC14.08□□□□□ -0.16
MMP11P24347 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.08□□□□□ -0.16
MMP11P24347 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.08□□□□□ -0.16
MMP11P24347 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.08□□□□□ -0.16
MMP11P24347 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.08□□□□□ -0.16
MMP11P24347 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
MMP11P24347 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.08□□□□□ -0.16
MMP11P24347 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.08□□□□□ -0.16
MMP11P24347 AC244452.3-201ENST00000636814 210 ntBASIC14.08□□□□□ -0.16
MMP11P24347 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.08□□□□□ -0.16
MMP11P24347 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
MMP11P24347 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.08□□□□□ -0.16
MMP11P24347 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.08□□□□□ -0.16
MMP11P24347 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
MMP11P24347 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
MMP11P24347 FKBP4P6-201ENST00000457486 1332 ntBASIC14.08□□□□□ -0.16
MMP11P24347 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
MMP11P24347 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 AC015656.1-201ENST00000624209 3578 ntBASIC14.08□□□□□ -0.16
MMP11P24347 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP11P24347 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 AP000593.2-201ENST00000542775 1433 ntBASIC14.07□□□□□ -0.16
MMP11P24347 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
MMP11P24347 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.07□□□□□ -0.16
MMP11P24347 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
MMP11P24347 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
MMP11P24347 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.07□□□□□ -0.16
MMP11P24347 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
MMP11P24347 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
MMP11P24347 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
MMP11P24347 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 BCYRN1-201ENST00000418539 200 ntBASIC14.07□□□□□ -0.16
MMP11P24347 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.07□□□□□ -0.16
MMP11P24347 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.07□□□□□ -0.16
MMP11P24347 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
MMP11P24347 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.07□□□□□ -0.16
MMP11P24347 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.07□□□□□ -0.16
MMP11P24347 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.07□□□□□ -0.16
MMP11P24347 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
MMP11P24347 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP11P24347 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.07□□□□□ -0.16
MMP11P24347 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
MMP11P24347 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
MMP11P24347 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.07□□□□□ -0.16
MMP11P24347 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.07□□□□□ -0.16
MMP11P24347 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
MMP11P24347 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
MMP11P24347 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
MMP11P24347 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP11P24347 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.06□□□□□ -0.16
MMP11P24347 AC113367.3-201ENST00000508316 1912 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms