Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 SLED1-202ENST00000512051 380 ntBASIC12.61□□□□□ -0.39
VAMP1P23763 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.61□□□□□ -0.39
VAMP1P23763 AP000842.3-202ENST00000569238 1080 ntBASIC12.61□□□□□ -0.39
VAMP1P23763 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
VAMP1P23763 AC121493.1-201ENST00000602316 450 ntBASIC12.61□□□□□ -0.39
VAMP1P23763 AL773604.1-201ENST00000617417 272 ntBASIC12.61□□□□□ -0.39
VAMP1P23763 AC116407.3-201ENST00000623905 1129 ntBASIC12.61□□□□□ -0.39
VAMP1P23763 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
VAMP1P23763 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
VAMP1P23763 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.61□□□□□ -0.39
VAMP1P23763 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.61□□□□□ -0.39
VAMP1P23763 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
VAMP1P23763 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.61□□□□□ -0.39
VAMP1P23763 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.61□□□□□ -0.39
VAMP1P23763 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.61□□□□□ -0.39
VAMP1P23763 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
VAMP1P23763 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.61□□□□□ -0.39
VAMP1P23763 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
VAMP1P23763 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
VAMP1P23763 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
VAMP1P23763 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
VAMP1P23763 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
VAMP1P23763 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 AC073548.1-201ENST00000624088 1882 ntBASIC12.6□□□□□ -0.39
VAMP1P23763 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
VAMP1P23763 AL133267.1-201ENST00000398220 340 ntBASIC12.6□□□□□ -0.39
VAMP1P23763 AL355306.1-201ENST00000415580 579 ntBASIC12.6□□□□□ -0.39
VAMP1P23763 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.6□□□□□ -0.39
VAMP1P23763 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 RN7SL589P-201ENST00000481268 310 ntBASIC12.6□□□□□ -0.39
VAMP1P23763 TMEM198B-204ENST00000484016 896 ntBASIC12.6□□□□□ -0.39
VAMP1P23763 AC110800.1-201ENST00000505498 441 ntTSL 2 BASIC12.6□□□□□ -0.39
VAMP1P23763 AC079776.4-201ENST00000511039 504 ntBASIC12.6□□□□□ -0.39
VAMP1P23763 IGHV3-62-201ENST00000520057 340 ntBASIC12.6□□□□□ -0.39
VAMP1P23763 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.6□□□□□ -0.39
VAMP1P23763 PDPK2P-202ENST00000562415 1191 ntBASIC12.6□□□□□ -0.39
VAMP1P23763 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.6□□□□□ -0.39
VAMP1P23763 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.6□□□□□ -0.39
VAMP1P23763 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
VAMP1P23763 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.6□□□□□ -0.39
VAMP1P23763 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.6□□□□□ -0.39
VAMP1P23763 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.6□□□□□ -0.39
VAMP1P23763 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
VAMP1P23763 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.6□□□□□ -0.39
VAMP1P23763 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
VAMP1P23763 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VAMP1P23763 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
VAMP1P23763 AL365181.3-201ENST00000605886 3222 ntBASIC12.6□□□□□ -0.39
VAMP1P23763 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
VAMP1P23763 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
VAMP1P23763 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.59□□□□□ -0.39
VAMP1P23763 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.59□□□□□ -0.39
VAMP1P23763 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
VAMP1P23763 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.59□□□□□ -0.39
VAMP1P23763 AC015818.8-201ENST00000587907 1519 ntBASIC12.59□□□□□ -0.39
VAMP1P23763 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
VAMP1P23763 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
VAMP1P23763 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
VAMP1P23763 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.59□□□□□ -0.39
VAMP1P23763 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.59□□□□□ -0.39
VAMP1P23763 AL031284.1-201ENST00000419297 478 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms