Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A2P16615 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A2P16615 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ATP2A2P16615 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A2P16615 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A2P16615 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.41■□□□□ 0.22
ATP2A2P16615 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A2P16615 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A2P16615 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A2P16615 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A2P16615 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A2P16615 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A2P16615 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A2P16615 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A2P16615 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A2P16615 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A2P16615 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ATP2A2P16615 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A2P16615 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.41■□□□□ 0.22
ATP2A2P16615 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.41■□□□□ 0.22
ATP2A2P16615 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.41■□□□□ 0.22
ATP2A2P16615 PUDPP3-201ENST00000445368 636 ntBASIC16.41■□□□□ 0.22
ATP2A2P16615 RN7SL181P-201ENST00000462921 277 ntBASIC16.41■□□□□ 0.22
ATP2A2P16615 AC116345.2-201ENST00000512837 523 ntBASIC16.41■□□□□ 0.22
ATP2A2P16615 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
ATP2A2P16615 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.41■□□□□ 0.22
ATP2A2P16615 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ATP2A2P16615 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ATP2A2P16615 AC090164.2-201ENST00000611487 516 ntBASIC16.41■□□□□ 0.22
ATP2A2P16615 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ATP2A2P16615 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A2P16615 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A2P16615 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A2P16615 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A2P16615 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ATP2A2P16615 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A2P16615 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A2P16615 CLUHP2-201ENST00000426660 1303 ntBASIC16.41■□□□□ 0.22
ATP2A2P16615 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ATP2A2P16615 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ATP2A2P16615 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A2P16615 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ATP2A2P16615 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A2P16615 AC067750.1-201ENST00000608826 6545 ntBASIC16.41■□□□□ 0.22
ATP2A2P16615 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A2P16615 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A2P16615 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2A2P16615 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
ATP2A2P16615 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
ATP2A2P16615 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ATP2A2P16615 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 AC023908.3-201ENST00000564211 3047 ntBASIC16.4■□□□□ 0.22
ATP2A2P16615 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
ATP2A2P16615 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
ATP2A2P16615 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
ATP2A2P16615 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2A2P16615 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2A2P16615 ISCA2P1-201ENST00000425548 448 ntBASIC16.4■□□□□ 0.22
ATP2A2P16615 PDIA3P2-201ENST00000428073 158 ntBASIC16.4■□□□□ 0.22
ATP2A2P16615 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
ATP2A2P16615 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.4■□□□□ 0.22
ATP2A2P16615 AC090857.1-201ENST00000527400 390 ntBASIC16.4■□□□□ 0.22
ATP2A2P16615 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2A2P16615 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2A2P16615 NPM1P43-201ENST00000558669 786 ntBASIC16.4■□□□□ 0.22
ATP2A2P16615 AC100827.2-201ENST00000563214 1194 ntBASIC16.4■□□□□ 0.22
ATP2A2P16615 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 AC005324.6-201ENST00000587972 613 ntBASIC16.4■□□□□ 0.22
ATP2A2P16615 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2A2P16615 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.4■□□□□ 0.22
ATP2A2P16615 AL162426.1-201ENST00000624141 743 ntBASIC16.4■□□□□ 0.22
ATP2A2P16615 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
ATP2A2P16615 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2A2P16615 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ATP2A2P16615 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ATP2A2P16615 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.4■□□□□ 0.22
ATP2A2P16615 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2A2P16615 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A2P16615 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms