Protein–RNA interactions for Protein: P12074

COX6A1, Cytochrome c oxidase subunit 6A1, mitochondrial, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P12074 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.54□□□□□ -0.24
COX6A1P12074 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COX6A1P12074 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COX6A1P12074 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COX6A1P12074 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.54□□□□□ -0.24
COX6A1P12074 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COX6A1P12074 FRMPD2B-201ENST00000431305 1347 ntBASIC13.54□□□□□ -0.24
COX6A1P12074 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.54□□□□□ -0.24
COX6A1P12074 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COX6A1P12074 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.54□□□□□ -0.24
COX6A1P12074 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.54□□□□□ -0.24
COX6A1P12074 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.54□□□□□ -0.24
COX6A1P12074 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.54□□□□□ -0.24
COX6A1P12074 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.54□□□□□ -0.24
COX6A1P12074 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COX6A1P12074 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COX6A1P12074 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COX6A1P12074 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COX6A1P12074 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COX6A1P12074 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
COX6A1P12074 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COX6A1P12074 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.53□□□□□ -0.24
COX6A1P12074 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
COX6A1P12074 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.53□□□□□ -0.24
COX6A1P12074 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.53□□□□□ -0.24
COX6A1P12074 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.53□□□□□ -0.24
COX6A1P12074 AL354702.1-201ENST00000442006 1960 ntBASIC13.53□□□□□ -0.24
COX6A1P12074 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.53□□□□□ -0.24
COX6A1P12074 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
COX6A1P12074 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
COX6A1P12074 AC091046.1-201ENST00000331871 207 ntBASIC13.53□□□□□ -0.24
COX6A1P12074 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
COX6A1P12074 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 AC092506.1-202ENST00000401022 528 ntBASIC13.53□□□□□ -0.24
COX6A1P12074 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.53□□□□□ -0.24
COX6A1P12074 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.53□□□□□ -0.24
COX6A1P12074 TSPY25P-201ENST00000429463 745 ntBASIC13.53□□□□□ -0.24
COX6A1P12074 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.53□□□□□ -0.24
COX6A1P12074 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.53□□□□□ -0.24
COX6A1P12074 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.53□□□□□ -0.24
COX6A1P12074 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.53□□□□□ -0.24
COX6A1P12074 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.53□□□□□ -0.24
COX6A1P12074 MIR3188-201ENST00000583494 85 ntBASIC13.53□□□□□ -0.24
COX6A1P12074 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.53□□□□□ -0.24
COX6A1P12074 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.53□□□□□ -0.24
COX6A1P12074 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.53□□□□□ -0.24
COX6A1P12074 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.53□□□□□ -0.24
COX6A1P12074 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.53□□□□□ -0.24
COX6A1P12074 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.53□□□□□ -0.24
COX6A1P12074 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.53□□□□□ -0.24
COX6A1P12074 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 AC144831.1-201ENST00000573312 2656 ntBASIC13.53□□□□□ -0.24
COX6A1P12074 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
COX6A1P12074 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COX6A1P12074 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.52□□□□□ -0.24
COX6A1P12074 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COX6A1P12074 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COX6A1P12074 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.52□□□□□ -0.24
COX6A1P12074 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COX6A1P12074 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COX6A1P12074 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COX6A1P12074 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
COX6A1P12074 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COX6A1P12074 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COX6A1P12074 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.52□□□□□ -0.24
COX6A1P12074 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
COX6A1P12074 FGD5P1-202ENST00000614866 2498 ntBASIC13.52□□□□□ -0.24
COX6A1P12074 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
COX6A1P12074 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
COX6A1P12074 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
COX6A1P12074 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
COX6A1P12074 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
COX6A1P12074 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
COX6A1P12074 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
COX6A1P12074 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COX6A1P12074 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COX6A1P12074 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms