Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VTNP04004 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VTNP04004 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
VTNP04004 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.13■□□□□ 0.17
VTNP04004 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VTNP04004 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.13■□□□□ 0.17
VTNP04004 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VTNP04004 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.13■□□□□ 0.17
VTNP04004 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
VTNP04004 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.13■□□□□ 0.17
VTNP04004 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
VTNP04004 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VTNP04004 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
VTNP04004 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VTNP04004 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 AC015688.4-201ENST00000580780 1647 ntBASIC16.12■□□□□ 0.17
VTNP04004 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.12■□□□□ 0.17
VTNP04004 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
VTNP04004 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.12■□□□□ 0.17
VTNP04004 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
VTNP04004 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.12■□□□□ 0.17
VTNP04004 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.12■□□□□ 0.17
VTNP04004 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.12■□□□□ 0.17
VTNP04004 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.12■□□□□ 0.17
VTNP04004 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 AC239868.1-201ENST00000369385 493 ntBASIC16.12■□□□□ 0.17
VTNP04004 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.12■□□□□ 0.17
VTNP04004 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.12■□□□□ 0.17
VTNP04004 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.12■□□□□ 0.17
VTNP04004 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.12■□□□□ 0.17
VTNP04004 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
VTNP04004 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.12■□□□□ 0.17
VTNP04004 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.12■□□□□ 0.17
VTNP04004 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
VTNP04004 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.12■□□□□ 0.17
VTNP04004 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.12■□□□□ 0.17
VTNP04004 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.12■□□□□ 0.17
VTNP04004 AC012044.1-201ENST00000603431 297 ntBASIC16.12■□□□□ 0.17
VTNP04004 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.12■□□□□ 0.17
VTNP04004 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.12■□□□□ 0.17
VTNP04004 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 TSPY26P-202ENST00000565928 3884 ntBASIC16.12■□□□□ 0.17
VTNP04004 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.12■□□□□ 0.17
VTNP04004 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
VTNP04004 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.12■□□□□ 0.17
VTNP04004 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.12■□□□□ 0.17
VTNP04004 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VTNP04004 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.11■□□□□ 0.17
VTNP04004 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
VTNP04004 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
VTNP04004 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.11■□□□□ 0.17
VTNP04004 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
VTNP04004 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
VTNP04004 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
VTNP04004 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.11■□□□□ 0.17
VTNP04004 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.11■□□□□ 0.17
VTNP04004 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.11■□□□□ 0.17
VTNP04004 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
VTNP04004 KRT18P36-201ENST00000411618 1276 ntBASIC16.11■□□□□ 0.17
VTNP04004 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.11■□□□□ 0.17
VTNP04004 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.11■□□□□ 0.17
VTNP04004 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.11■□□□□ 0.17
VTNP04004 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.11■□□□□ 0.17
VTNP04004 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.11■□□□□ 0.17
VTNP04004 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.11■□□□□ 0.17
VTNP04004 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.11■□□□□ 0.17
VTNP04004 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.11■□□□□ 0.17
VTNP04004 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
VTNP04004 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms