Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 KRT90P-201ENST00000549264 1064 ntBASIC11.72□□□□□ -0.53
TRGV3P03979 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC11.72□□□□□ -0.53
TRGV3P03979 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC11.72□□□□□ -0.53
TRGV3P03979 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC11.72□□□□□ -0.53
TRGV3P03979 AC004466.1-201ENST00000599515 1080 ntBASIC11.72□□□□□ -0.53
TRGV3P03979 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC11.72□□□□□ -0.53
TRGV3P03979 AL512343.1-201ENST00000605837 169 ntBASIC11.72□□□□□ -0.53
TRGV3P03979 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
TRGV3P03979 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV3P03979 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV3P03979 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV3P03979 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV3P03979 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
TRGV3P03979 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV3P03979 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV3P03979 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV3P03979 AC139749.1-202ENST00000617529 3139 ntBASIC11.72□□□□□ -0.53
TRGV3P03979 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV3P03979 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV3P03979 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV3P03979 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV3P03979 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRGV3P03979 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
TRGV3P03979 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
TRGV3P03979 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV3P03979 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.71□□□□□ -0.53
TRGV3P03979 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.71□□□□□ -0.53
TRGV3P03979 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV3P03979 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV3P03979 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV3P03979 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV3P03979 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
TRGV3P03979 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV3P03979 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
TRGV3P03979 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
TRGV3P03979 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
TRGV3P03979 MIR193BHG-211ENST00000641433 5365 ntBASIC11.71□□□□□ -0.53
TRGV3P03979 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV3P03979 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV3P03979 CLUHP2-201ENST00000426660 1303 ntBASIC11.71□□□□□ -0.53
TRGV3P03979 FKBP4P6-201ENST00000457486 1332 ntBASIC11.71□□□□□ -0.53
TRGV3P03979 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV3P03979 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
TRGV3P03979 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV3P03979 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV3P03979 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV3P03979 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV3P03979 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.71□□□□□ -0.53
TRGV3P03979 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV3P03979 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.71□□□□□ -0.53
TRGV3P03979 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.71□□□□□ -0.53
TRGV3P03979 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC11.71□□□□□ -0.53
TRGV3P03979 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV3P03979 CTBP2P5-201ENST00000454986 1264 ntBASIC11.71□□□□□ -0.53
TRGV3P03979 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV3P03979 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC11.71□□□□□ -0.53
TRGV3P03979 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
TRGV3P03979 HILS1-202ENST00000545329 423 ntBASIC11.71□□□□□ -0.53
TRGV3P03979 AC078819.1-201ENST00000547454 765 ntBASIC11.71□□□□□ -0.53
TRGV3P03979 AC012085.1-201ENST00000548270 765 ntBASIC11.71□□□□□ -0.53
TRGV3P03979 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.71□□□□□ -0.53
TRGV3P03979 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC11.71□□□□□ -0.53
TRGV3P03979 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC11.71□□□□□ -0.53
TRGV3P03979 RHOXF1P1-202ENST00000635473 501 ntBASIC11.71□□□□□ -0.53
TRGV3P03979 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC11.71□□□□□ -0.53
TRGV3P03979 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRGV3P03979 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC11.71□□□□□ -0.53
TRGV3P03979 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.71□□□□□ -0.54
TRGV3P03979 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRGV3P03979 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRGV3P03979 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRGV3P03979 API5-203ENST00000455725 2257 ntTSL 2 BASIC11.71□□□□□ -0.54
TRGV3P03979 AC018442.1-201ENST00000421439 2061 ntBASIC11.71□□□□□ -0.54
TRGV3P03979 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
TRGV3P03979 AC018529.2-202ENST00000611482 3087 ntBASIC11.71□□□□□ -0.54
TRGV3P03979 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11.7□□□□□ -0.54
TRGV3P03979 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
TRGV3P03979 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
TRGV3P03979 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV3P03979 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV3P03979 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV3P03979 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV3P03979 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV3P03979 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV3P03979 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
TRGV3P03979 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC11.7□□□□□ -0.54
TRGV3P03979 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
TRGV3P03979 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
TRGV3P03979 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV3P03979 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV3P03979 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
TRGV3P03979 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.7□□□□□ -0.54
TRGV3P03979 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
TRGV3P03979 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC11.7□□□□□ -0.54
TRGV3P03979 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
TRGV3P03979 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV3P03979 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC11.7□□□□□ -0.54
TRGV3P03979 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
TRGV3P03979 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC11.7□□□□□ -0.54
TRGV3P03979 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms