Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-ND3P03897 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.19■□□□□ 0.02
MT-ND3P03897 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
MT-ND3P03897 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND3P03897 AC023090.2-201ENST00000625182 2110 ntBASIC15.19■□□□□ 0.02
MT-ND3P03897 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-ND3P03897 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
MT-ND3P03897 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
MT-ND3P03897 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.18■□□□□ 0.02
MT-ND3P03897 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
MT-ND3P03897 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
MT-ND3P03897 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
MT-ND3P03897 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.18■□□□□ 0.02
MT-ND3P03897 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
MT-ND3P03897 AL512384.1-201ENST00000406683 331 ntBASIC15.18■□□□□ 0.02
MT-ND3P03897 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.18■□□□□ 0.02
MT-ND3P03897 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.18■□□□□ 0.02
MT-ND3P03897 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.18■□□□□ 0.02
MT-ND3P03897 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.18■□□□□ 0.02
MT-ND3P03897 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.18■□□□□ 0.02
MT-ND3P03897 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.18■□□□□ 0.02
MT-ND3P03897 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.18■□□□□ 0.02
MT-ND3P03897 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.18■□□□□ 0.02
MT-ND3P03897 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.18■□□□□ 0.02
MT-ND3P03897 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.18■□□□□ 0.02
MT-ND3P03897 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
MT-ND3P03897 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
MT-ND3P03897 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.18■□□□□ 0.02
MT-ND3P03897 CHCHD2P3-201ENST00000603038 451 ntBASIC15.18■□□□□ 0.02
MT-ND3P03897 AC093726.1-201ENST00000608064 963 ntBASIC15.18■□□□□ 0.02
MT-ND3P03897 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.18■□□□□ 0.02
MT-ND3P03897 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.18■□□□□ 0.02
MT-ND3P03897 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
MT-ND3P03897 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
MT-ND3P03897 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.18■□□□□ 0.02
MT-ND3P03897 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.18■□□□□ 0.02
MT-ND3P03897 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.18■□□□□ 0.02
MT-ND3P03897 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND3P03897 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.17■□□□□ 0.02
MT-ND3P03897 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
MT-ND3P03897 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
MT-ND3P03897 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MT-ND3P03897 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.17■□□□□ 0.02
MT-ND3P03897 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.17■□□□□ 0.02
MT-ND3P03897 DMBT1P1-203ENST00000636837 4628 ntBASIC15.17■□□□□ 0.02
MT-ND3P03897 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
MT-ND3P03897 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.17■□□□□ 0.02
MT-ND3P03897 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.17■□□□□ 0.02
MT-ND3P03897 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.17■□□□□ 0.02
MT-ND3P03897 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
MT-ND3P03897 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.17■□□□□ 0.02
MT-ND3P03897 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
MT-ND3P03897 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.17■□□□□ 0.02
MT-ND3P03897 MYCLP2-201ENST00000449268 967 ntBASIC15.17■□□□□ 0.02
MT-ND3P03897 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.17■□□□□ 0.02
MT-ND3P03897 MEIS3P1-201ENST00000495167 958 ntBASIC15.17■□□□□ 0.02
MT-ND3P03897 SPDYE18-201ENST00000510091 1050 ntBASIC15.17■□□□□ 0.02
MT-ND3P03897 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.17■□□□□ 0.02
MT-ND3P03897 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.17■□□□□ 0.02
MT-ND3P03897 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND3P03897 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
MT-ND3P03897 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.17■□□□□ 0.02
MT-ND3P03897 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.17■□□□□ 0.02
MT-ND3P03897 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
MT-ND3P03897 AC000095.1-201ENST00000603208 874 ntBASIC15.17■□□□□ 0.02
MT-ND3P03897 AL008721.1-201ENST00000609964 604 ntBASIC15.17■□□□□ 0.02
MT-ND3P03897 MIR6752-201ENST00000618442 71 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms