Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.91□□□□□ -0.18
TRIM3O75382 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.91□□□□□ -0.18
TRIM3O75382 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRIM3O75382 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.91□□□□□ -0.18
TRIM3O75382 AC133552.6-201ENST00000613406 534 ntBASIC13.91□□□□□ -0.18
TRIM3O75382 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRIM3O75382 MIR6752-201ENST00000618442 71 ntBASIC13.91□□□□□ -0.18
TRIM3O75382 AC132938.4-201ENST00000623835 848 ntBASIC13.91□□□□□ -0.18
TRIM3O75382 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.91□□□□□ -0.18
TRIM3O75382 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.91□□□□□ -0.18
TRIM3O75382 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM3O75382 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRIM3O75382 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM3O75382 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM3O75382 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRIM3O75382 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM3O75382 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRIM3O75382 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM3O75382 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.91□□□□□ -0.18
TRIM3O75382 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM3O75382 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
TRIM3O75382 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM3O75382 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM3O75382 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.91□□□□□ -0.18
TRIM3O75382 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.91□□□□□ -0.18
TRIM3O75382 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM3O75382 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRIM3O75382 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM3O75382 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRIM3O75382 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TRIM3O75382 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
TRIM3O75382 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRIM3O75382 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM3O75382 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
TRIM3O75382 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TRIM3O75382 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM3O75382 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRIM3O75382 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TRIM3O75382 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.9□□□□□ -0.18
TRIM3O75382 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM3O75382 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM3O75382 CNN2P8-201ENST00000421872 913 ntBASIC13.9□□□□□ -0.18
TRIM3O75382 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM3O75382 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.9□□□□□ -0.18
TRIM3O75382 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.9□□□□□ -0.18
TRIM3O75382 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.9□□□□□ -0.18
TRIM3O75382 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TRIM3O75382 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.9□□□□□ -0.18
TRIM3O75382 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.9□□□□□ -0.18
TRIM3O75382 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRIM3O75382 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM3O75382 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
TRIM3O75382 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM3O75382 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.9□□□□□ -0.18
TRIM3O75382 AC087386.2-201ENST00000623212 4637 ntBASIC13.9□□□□□ -0.18
TRIM3O75382 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRIM3O75382 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.9□□□□□ -0.18
TRIM3O75382 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM3O75382 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM3O75382 AL359881.3-201ENST00000602640 1721 ntBASIC13.9□□□□□ -0.18
TRIM3O75382 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRIM3O75382 LRRC59-203ENST00000576448 1531 ntBASIC13.9□□□□□ -0.19
TRIM3O75382 AL360270.3-201ENST00000609118 1348 ntBASIC13.9□□□□□ -0.19
TRIM3O75382 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.89□□□□□ -0.19
TRIM3O75382 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM3O75382 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.89□□□□□ -0.19
TRIM3O75382 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms