Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 CALR4P-201ENST00000431943 946 ntBASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 AKR7A2P1-201ENST00000460134 915 ntBASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 MESTP3-201ENST00000503460 968 ntBASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 AP001002.3-201ENST00000623482 206 ntBASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 TNRC18P2-201ENST00000417666 2714 ntBASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 AC091804.1-201ENST00000486888 567 ntBASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 SCARNA20.5-201ENST00000516991 142 ntBASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA2E9PIF3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms