Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 AC013726.1-201ENST00000563747 2285 ntBASIC17.08■□□□□ 0.32
USP17L11C9JVI0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 LINC01101-201ENST00000622953 1884 ntBASIC17.07■□□□□ 0.32
USP17L11C9JVI0 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 AL627231.1-201ENST00000394467 1125 ntBASIC17.07■□□□□ 0.32
USP17L11C9JVI0 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 NOC2LP1-201ENST00000450578 752 ntBASIC17.07■□□□□ 0.32
USP17L11C9JVI0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 IQSEC3P1-201ENST00000538799 536 ntBASIC17.07■□□□□ 0.32
USP17L11C9JVI0 RBM8B-201ENST00000555532 525 ntBASIC17.07■□□□□ 0.32
USP17L11C9JVI0 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 AC026803.1-201ENST00000569130 274 ntBASIC17.07■□□□□ 0.32
USP17L11C9JVI0 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.07■□□□□ 0.32
USP17L11C9JVI0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.07■□□□□ 0.32
USP17L11C9JVI0 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 AC018529.2-202ENST00000611482 3087 ntBASIC17.07■□□□□ 0.32
USP17L11C9JVI0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP17L11C9JVI0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 RPL17P11-201ENST00000417593 544 ntBASIC17.06■□□□□ 0.32
USP17L11C9JVI0 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 AC073352.2-201ENST00000609385 439 ntBASIC17.06■□□□□ 0.32
USP17L11C9JVI0 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.06■□□□□ 0.32
USP17L11C9JVI0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms