Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 AC010141.1-201ENST00000411585 623 ntBASIC14.07□□□□□ -0.16
LRIT2A6NDA9 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 DUX4L45-201ENST00000566406 1057 ntBASIC14.07□□□□□ -0.16
LRIT2A6NDA9 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 AL136301.1-201ENST00000615830 422 ntBASIC14.07□□□□□ -0.16
LRIT2A6NDA9 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 YBX1P6-201ENST00000442962 1002 ntBASIC14.06□□□□□ -0.16
LRIT2A6NDA9 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 HIST2H2BB-201ENST00000449108 381 ntBASIC14.06□□□□□ -0.16
LRIT2A6NDA9 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 SHC1P1-201ENST00000425230 1745 ntBASIC14.06□□□□□ -0.16
LRIT2A6NDA9 AL023775.1-201ENST00000454907 1746 ntBASIC14.06□□□□□ -0.16
LRIT2A6NDA9 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 AC026748.1-201ENST00000624349 3251 ntBASIC14.06□□□□□ -0.16
LRIT2A6NDA9 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 AC005089.1-201ENST00000619486 2241 ntBASIC14.06□□□□□ -0.16
LRIT2A6NDA9 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 AC215219.1-201ENST00000400706 1817 ntBASIC14.06□□□□□ -0.16
LRIT2A6NDA9 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.06□□□□□ -0.16
LRIT2A6NDA9 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT2A6NDA9 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.05□□□□□ -0.16
LRIT2A6NDA9 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT2A6NDA9 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT2A6NDA9 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT2A6NDA9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT2A6NDA9 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms