Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 BX842568.4-201ENST00000421222 227 ntBASIC12.91□□□□□ -0.34
SHISA3A0PJX4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 SDHAP3-202ENST00000515467 728 ntBASIC12.91□□□□□ -0.34
SHISA3A0PJX4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 FLJ16779-201ENST00000612722 7638 ntBASIC12.91□□□□□ -0.34
SHISA3A0PJX4 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 AC125807.2-201ENST00000513358 3514 ntBASIC12.91□□□□□ -0.34
SHISA3A0PJX4 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.9□□□□□ -0.34
SHISA3A0PJX4 HLA-V-204ENST00000476601 1289 ntBASIC12.9□□□□□ -0.34
SHISA3A0PJX4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 AC044860.1-202ENST00000559481 777 ntBASIC12.9□□□□□ -0.34
SHISA3A0PJX4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 AC006538.3-201ENST00000612495 578 ntBASIC12.9□□□□□ -0.34
SHISA3A0PJX4 AL138828.2-201ENST00000615812 383 ntBASIC12.9□□□□□ -0.34
SHISA3A0PJX4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.9□□□□□ -0.34
SHISA3A0PJX4 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms